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Missingness in variables that define study eligibility criteria is a seldom addressed challenge in electronic health record (EHR)-based settings. It is typically the case that patients with incomplete eligibility information are excluded…

Although the descriptive epidemiology of primary breast cancer is well characterized in the US, breast cancer recurrence rates have not been measured in an unselected population. The number of breast cancer survivors at risk for recurrence…

: Introduction-objectives: A virtual-reality learning environment dedicated to prostate biopsies was designed to overcome the limitations of current classical teaching methods. The aim of this study was to validate reliability, face,…

计算机与社会 · 计算机科学 2013-11-05 Gaelle Fiard , Sonia-Yuki Selmi , Emmanuel Promayon , Lucile Vadcard , Jean-Luc Descotes , Jocelyne Troccaz

Selective Classification, wherein models can reject low-confidence predictions, promises reliable translation of machine-learning based classification systems to real-world scenarios such as clinical diagnostics. While current evaluation of…

Variants of Uncertain Significance (VUS) limit the clinical utility of prostate cancer genomics by delaying diagnosis and therapy when evidence for pathogenicity or benignity is incomplete. Progress is further limited by inconsistent…

定量方法 · 定量生物学 2025-11-14 Abraham Francisco Arellano Tavara , Umesh Kumar , Jathurshan Pradeepkumar , Jimeng Sun

Numerous machine learning (ML) models have been developed for breast cancer using various types of data. Successful external validation (EV) of ML models is important evidence of their generalizability. The aim of this systematic review was…

计算机视觉与模式识别 · 计算机科学 2023-12-13 Ricardo Gonzalez , Peyman Nejat , Ashirbani Saha , Clinton J. V. Campbell , Andrew P. Norgan , Cynthia Lokker

It is increasingly common clinically for cancer specimens to be examined using techniques that identify somatic mutations. In principle these mutational profiles can be used to diagnose the tissue of origin, a critical task for the 3-5% of…

统计方法学 · 统计学 2020-07-14 Saptarshi Chakraborty , Colin B. Begg , Ronglai Shen

Robust correlation estimation is essential in high-dimensional settings, particularly when data are contaminated by outliers or exhibit heavy-tailed behavior. Many robust loss functions of practical interest-such as those involving…

应用统计 · 统计学 2025-06-19 Priyam Das

Combining experimental and observational follow-up datasets has received a lot of attention lately. In a time-to-event setting, recent work has used medicare claims to extend the follow-up period for participants in a prostate cancer…

统计方法学 · 统计学 2022-04-12 Gang Cheng , Yen-Chi Chen , Joseph M. Unger , Cathee Till , Ying-Qi Zhao

For many high-dimensional studies, additional information on the variables, like (genomic) annotation or external p-values, is available. In the context of binary and continuous prediction, we develop a method for adaptive group-regularized…

External validation is widely regarded as the gold standard for prognostic model evaluation. In this study, we challenge the assumption that successful external calibration guarantees model generalizability and propose two complementary…

统计方法学 · 统计学 2026-04-21 Dimitris Bertsimas , Carol Gao , Angelos G. Koulouras , Georgios Antonios Margonis

Identification of biomarkers is an emerging area in Oncology. In this article, we develop an efficient statistical procedure for classification of protein markers according to their effect on cancer progression. A high-dimensional…

应用统计 · 统计学 2021-01-08 Souvik Banerjee , Gajendra K. Vishwakarma , Atanu Bhattacharjee

Objective Electronic health records (EHRs) are a promising source of data for health outcomes research in oncology. A challenge in using EHR data is that selecting cohorts of patients often requires information in unstructured parts of the…

Metastatic castration-resistant prostate cancer (mCRPC) is a highly aggressive disease with poor prognosis and heterogeneous treatment response. In this work, we developed and externally validated a visit-level 180-day mortality risk model…

机器学习 · 计算机科学 2026-01-29 Javier Mencia-Ledo , Mohammad Noaeen , Zahra Shakeri

In a prospective cohort study, examining all participants for incidence of the condition of interest may be prohibitively expensive. For example, the "gold standard" for diagnosing temporomandibular disorder (TMD) is a physical examination…

统计方法学 · 统计学 2015-07-08 Naomi Brownstein , Jianwen Cai , Gary Slade , Eric Bair

Identification of patients at high risk for readmission could help reduce morbidity and mortality as well as healthcare costs. Most of the existing studies on readmission prediction did not compare the contribution of data categories. In…

定量方法 · 定量生物学 2018-03-23 Wendong Ge , Hee Yeun Kim , Sonali Desai , Leonid Perlovsky , Alexander Turchin

Purpose: We propose a general framework for quantifying predictive uncertainties of dose-related quantities and leveraging this information in a dose mimicking problem in the context of automated radiation therapy treatment planning.…

医学物理 · 物理学 2021-09-08 Tianfang Zhang , Rasmus Bokrantz , Jimmy Olsson

This paper presents a fairness-audited and interpretable machine learning framework for predicting polycystic ovary syndrome (PCOS), designed to evaluate model performance and identify diagnostic disparities across patient subgroups. The…

机器学习 · 计算机科学 2025-11-18 Asma Sadia Khan , Sadia Tabassum

Stroke remains a leading cause of death and disability worldwide, yet effective prediction of stroke risk using large-scale population data remains challenging due to data imbalance and high-dimensional features. In this study, we develop…

应用统计 · 统计学 2025-10-28 Jinbo Niu

In genetic epidemiological studies, family history data are collected on relatives of study participants and used to estimate the age-specific risk of disease for individuals who carry a causal mutation. However, a family member's genotype…