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Covariate adjustment is a general method for improving precision when estimating treatment effects in randomized trials and is recommended by the FDA in its 2023 guidance when baseline variables are prognostic for the primary outcome. We…

As the main workhorse for model selection, Cross Validation (CV) has achieved an empirical success due to its simplicity and intuitiveness. However, despite its ubiquitous role, CV often falls into the following notorious dilemmas. On the…

机器学习 · 计算机科学 2020-12-29 Weikai Li , Chuanxing Geng , Songcan Chen

Model inference, such as model comparison, model checking, and model selection, is an important part of model development. Leave-one-out cross-validation (LOO) is a general approach for assessing the generalizability of a model, but…

机器学习 · 统计学 2020-08-12 Måns Magnusson , Michael Riis Andersen , Johan Jonasson , Aki Vehtari

Survival analysis, as a challenging task, requires integrating Whole Slide Images (WSIs) and genomic data for comprehensive decision-making. There are two main challenges in this task: significant heterogeneity and complex inter- and…

图像与视频处理 · 电气工程与系统科学 2024-06-17 Conghao Xiong , Hao Chen , Hao Zheng , Dong Wei , Yefeng Zheng , Joseph J. Y. Sung , Irwin King

Representation learning offers a conduit to elucidate distinctive features within the latent space and interpret the deep models. However, the randomness of lesion distribution and the complexity of low-quality factors in medical images…

计算机视觉与模式识别 · 计算机科学 2024-04-09 Qingshan Hou , Shuai Cheng , Peng Cao , Jinzhu Yang , Xiaoli Liu , Osmar R. Zaiane , Yih Chung Tham

Identifying subgroups, which respond differently to a treatment, both in terms of efficacy and safety, is an important part of drug development. A well-known challenge in exploratory subgroup analyses is the small sample size in the…

统计计算 · 统计学 2016-06-28 Marius Thomas , Björn Bornkamp

Deep Learning has advanced significantly in medical applications, aiding disease diagnosis in Chest X-ray images. However, expanding model capabilities with new data remains a challenge, which Continual Learning (CL) aims to address.…

图像与视频处理 · 电气工程与系统科学 2025-07-08 Marina Ceccon , Davide Dalle Pezze , Alessandro Fabris , Gian Antonio Susto

Low-rank matrix estimation is a fundamental problem in statistics and machine learning with applications across biomedical sciences, including genetics, medical imaging, drug discovery, and electronic health record data analysis. In the…

统计方法学 · 统计学 2025-08-20 Sean McGrath , Cenhao Zhu , Ryan O'Dea , Min Guo , Rui Duan

An endeavor central to precision medicine is predictive biomarker discovery; they define patient subpopulations which stand to benefit most, or least, from a given treatment. The identification of these biomarkers is often the byproduct of…

统计方法学 · 统计学 2022-08-01 Philippe Boileau , Nina Ting Qi , Mark J. van der Laan , Sandrine Dudoit , Ning Leng

Cooperative Coevolution (CC) effectively addresses Large-Scale Global Optimization (LSGO) via decomposition but struggles with the emerging class of Heterogeneous LSGO (H-LSGO) problems arising from real-world applications, where…

神经与进化计算 · 计算机科学 2026-04-03 Wenjie Qiu , Zixin Wang , Hongyu Fang , Zeyuan Ma , Yue-Jiao Gong

Least absolute shrinkage and selection operator or Lasso is one of the widely used regularization methods in regression. Statisticians usually implement Lasso in practice by choosing the penalty parameter in a data-dependent way, the most…

统计方法学 · 统计学 2026-05-08 Mayukh Choudhury , Debraj Das

Receiver operating characteristic (ROC) analysis is widely used for evaluating diagnostic systems. Recent studies have shown that estimating an area under ROC curve (AUC) with standard cross-validation methods suffers from a large bias. The…

机器学习 · 统计学 2024-01-25 Ileana Montoya Perez , Antti Airola , Peter J. Boström , Ivan Jambor , Tapio Pahikkala

Monte Carlo methods, Variational Inference, and their combinations play a pivotal role in sampling from intractable probability distributions. However, current studies lack a unified evaluation framework, relying on disparate performance…

机器学习 · 计算机科学 2024-06-12 Denis Blessing , Xiaogang Jia , Johannes Esslinger , Francisco Vargas , Gerhard Neumann

The healthcare industry generates troves of unlabelled physiological data. This data can be exploited via contrastive learning, a self-supervised pre-training method that encourages representations of instances to be similar to one another.…

机器学习 · 计算机科学 2021-05-18 Dani Kiyasseh , Tingting Zhu , David A. Clifton

Despite the widespread use of deep learning methods for semantic segmentation of images that are acquired from a single source, clinicians often use multi-domain data for a detailed analysis. For instance, CT and MRI have advantages over…

图像与视频处理 · 电气工程与系统科学 2020-06-09 Bora Baydar , Savas Ozkan , A. Emre Kavur , N. Sinem Gezer , M. Alper Selver , Gozde Bozdagi Akar

Important objectives in cancer research are the prediction of a patient's risk based on molecular measurements such as gene expression data and the identification of new prognostic biomarkers (e.g. genes). In clinical practice, this is…

应用统计 · 统计学 2020-04-17 Katrin Madjar , Manuela Zucknick , Katja Ickstadt , Jörg Rahnenführer

Statistical machine learning models should be evaluated and validated before putting to work. Conventional k-fold Monte Carlo Cross-Validation (MCCV) procedure uses a pseudo-random sequence to partition instances into k subsets, which…

机器学习 · 统计学 2019-07-05 Liang Guo , Jianya Liu , Ruodan Lu

Background and Objectives: The variability and biases in the real-world performance benchmarking of deep learning models for medical imaging compromise their trustworthiness for real-world deployment. The common approach of holding out a…

The Receiver Operating Characteristic (ROC) curve stands as a cornerstone in assessing the efficacy of biomarkers for disease diagnosis. Beyond merely evaluating performance, it provides with an optimal cutoff for biomarker values, crucial…

统计方法学 · 统计学 2025-04-29 Soutik Ghosal

This study extensively compares conventional machine learning methods and deep learning for condition monitoring tasks using an AutoML toolbox. The experiments reveal consistent high accuracy in random K-fold cross-validation scenarios…

机器学习 · 计算机科学 2023-08-29 Payman Goodarzi , Andreas Schütze , Tizian Schneider