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Generative models for graph data are an important research topic in machine learning. Graph data comprise two levels that are typically analyzed separately: node-level properties such as the existence of a link between a pair of nodes, and…

机器学习 · 计算机科学 2023-01-18 Kiarash Zahirnia , Oliver Schulte , Parmis Naddaf , Ke Li

We propose a combination of a variational autoencoder and a transformer based model which fully utilises graph convolutional and graph pooling layers to operate directly on graphs. The transformer model implements a novel node encoding…

机器学习 · 计算机科学 2021-04-12 Joshua Mitton , Hans M. Senn , Klaas Wynne , Roderick Murray-Smith

Graph Auto-Encoders (GAEs) are powerful tools for graph representation learning. In this paper, we develop a novel Hierarchical Cluster-based GAE (HC-GAE), that can learn effective structural characteristics for graph data analysis. To this…

机器学习 · 计算机科学 2024-05-24 Zhuo Xu , Lu Bai , Lixin Cui , Ming Li , Yue Wang , Edwin R. Hancock

Recently, transformers have shown promising performance in learning graph representations. However, there are still some challenges when applying transformers to real-world scenarios due to the fact that deep transformers are hard to train…

机器学习 · 计算机科学 2022-05-13 Sixiao Zhang , Hongxu Chen , Haoran Yang , Xiangguo Sun , Philip S. Yu , Guandong Xu

Humans are able to create rich representations of their external reality. Their internal representations allow for cross-modality inference, where available perceptions can induce the perceptual experience of missing input modalities. In…

机器学习 · 计算机科学 2020-06-05 Miguel Vasco , Francisco S. Melo , Ana Paiva

Learning latent representations that are simultaneously expressive, geometrically well-structured, and reliably calibrated remains a central challenge for Variational Autoencoders (VAEs). Standard VAEs typically assume a diagonal Gaussian…

机器学习 · 计算机科学 2025-12-02 Mehmet Can Yavuz

We investigate deep generative models that can exchange multiple modalities bi-directionally, e.g., generating images from corresponding texts and vice versa. Recently, some studies handle multiple modalities on deep generative models, such…

机器学习 · 统计学 2016-11-08 Masahiro Suzuki , Kotaro Nakayama , Yutaka Matsuo

Recent advances have shown that GP priors, or their finite realisations, can be encoded using deep generative models such as variational autoencoders (VAEs). These learned generators can serve as drop-in replacements for the original priors…

Graph representation learning is a fundamental research theme and can be generalized to benefit multiple downstream tasks from the node and link levels to the higher graph level. In practice, it is desirable to develop task-agnostic general…

机器学习 · 计算机科学 2023-12-12 Hanxuan Yang , Qingchao Kong , Wenji Mao

We propose a multi-resolution convolutional autoencoder (MrCAE) architecture that integrates and leverages three highly successful mathematical architectures: (i) multigrid methods, (ii) convolutional autoencoders and (iii) transfer…

机器学习 · 计算机科学 2020-04-13 Yuying Liu , Colin Ponce , Steven L. Brunton , J. Nathan Kutz

Graph link prediction has long been a central problem in graph representation learning in both network analysis and generative modeling. Recent progress in deep learning has introduced increasingly sophisticated architectures for capturing…

机器学习 · 计算机科学 2025-12-02 Siddhant Karki

Graph Neural Networks (GNNs) and Variational Autoencoders (VAEs) have been widely used in modeling and generating graphs with latent factors. However, there is no clear explanation of what these latent factors are and why they perform well.…

机器学习 · 计算机科学 2020-11-19 Jia Li , Tomasyu Yu , Jiajin Li , Honglei Zhang , Kangfei Zhao , YU Rong , Hong Cheng , Junzhou Huang

Autoencoders are effective deep learning models that can function as generative models and learn latent representations for downstream tasks. The use of graph autoencoders - with both encoder and decoder implemented as message passing…

机器学习 · 计算机科学 2025-03-04 Magnus Cunow , Gerrit Großmann

Multiple modalities often co-occur when describing natural phenomena. Learning a joint representation of these modalities should yield deeper and more useful representations. Previous generative approaches to multi-modal input either do not…

机器学习 · 计算机科学 2018-11-13 Mike Wu , Noah Goodman

Multimodal recommender systems amalgamate multimodal information (e.g., textual descriptions, images) into a collaborative filtering framework to provide more accurate recommendations. While the incorporation of multimodal information could…

信息检索 · 计算机科学 2024-02-27 Xin Zhou , Chunyan Miao

We present RL-VAE, a graph-to-graph variational autoencoder that uses reinforcement learning to decode molecular graphs from latent embeddings. Methods have been described previously for graph-to-graph autoencoding, but these approaches…

机器学习 · 计算机科学 2019-06-06 Steven Kearnes , Li Li , Patrick Riley

Learning generative models that span multiple data modalities, such as vision and language, is often motivated by the desire to learn more useful, generalisable representations that faithfully capture common underlying factors between the…

机器学习 · 统计学 2019-11-11 Yuge Shi , N. Siddharth , Brooks Paige , Philip H. S. Torr

Generative self-supervised learning (SSL), especially masked autoencoders, has become one of the most exciting learning paradigms and has shown great potential in handling graph data. However, real-world graphs are always heterogeneous,…

机器学习 · 计算机科学 2023-02-13 Yijun Tian , Kaiwen Dong , Chunhui Zhang , Chuxu Zhang , Nitesh V. Chawla

By composing graphical models with deep learning architectures, we learn generative models with the strengths of both frameworks. The structured variational autoencoder (SVAE) inherits structure and interpretability from graphical models,…

机器学习 · 计算机科学 2023-11-15 Harry Bendekgey , Gabriel Hope , Erik B. Sudderth

Periodic graphs are graphs consisting of repetitive local structures, such as crystal nets and polygon mesh. Their generative modeling has great potential in real-world applications such as material design and graphics synthesis. Classical…

机器学习 · 计算机科学 2022-10-07 Shiyu Wang , Xiaojie Guo , Liang Zhao