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This research aims to develop a dynamic and scalable framework to facilitate harmonization of Common Data Elements (CDEs) across heterogeneous biomedical datasets by addressing challenges such as semantic heterogeneity, structural…

信息检索 · 计算机科学 2025-06-04 Madan Krishnamurthy , Daniel Korn , Melissa A Haendel , Christopher J Mungall , Anne E Thessen

We present a new method for time series clustering which we call the Hierarchical Spectral Merger (HSM) method. This procedure is based on the spectral theory of time series and identifies series that share similar oscillations or…

统计计算 · 统计学 2016-09-28 Carolina Euan , Hernando Ombao , Joaquin Ortega

Several clustering frameworks with interactive (semi-supervised) queries have been studied in the past. Recently, clustering with same-cluster queries has become popular. An algorithm in this setting has access to an oracle with full…

数据结构与算法 · 计算机科学 2019-08-15 Barna Saha , Sanjay Subramanian

In all state-of-the-art sketching and coreset techniques for clustering, as well as in the best known fixed-parameter tractable approximation algorithms, randomness plays a key role. For the classic $k$-median and $k$-means problems, there…

数据结构与算法 · 计算机科学 2023-10-09 Vincent Cohen-Addad , David Saulpic , Chris Schwiegelshohn

Recent advances in large language models enable documents to be represented as dense semantic embeddings, supporting similarity-based operations over large text collections. However, many web-scale systems still rely on flat clustering or…

计算与语言 · 计算机科学 2026-01-30 Thomas Haschka , Joseph Bakarji

We propose a hierarchical graph neural network (GNN) model that learns how to cluster a set of images into an unknown number of identities using a training set of images annotated with labels belonging to a disjoint set of identities. Our…

计算机视觉与模式识别 · 计算机科学 2021-07-20 Yifan Xing , Tong He , Tianjun Xiao , Yongxin Wang , Yuanjun Xiong , Wei Xia , David Wipf , Zheng Zhang , Stefano Soatto

Clustering plays a crucial role in computer science, facilitating data analysis and problem-solving across numerous fields. By partitioning large datasets into meaningful groups, clustering reveals hidden structures and relationships within…

数据库 · 计算机科学 2026-02-19 Aryan Esmailpour , Stavros Sintos

Conventional application of convolutional neural networks (CNNs) for image classification and recognition is based on the assumption that all target classes are equal(i.e., no hierarchy) and exclusive of one another (i.e., no overlap).…

机器学习 · 计算机科学 2019-06-04 Jaehoon Cha , Kyeong Soo Kim , Sanghyuk Lee

Hierarchical clustering is a widely used method for unsupervised learning with numerous applications. However, in the application of modern algorithms, the datasets studied are usually large and dynamic. If the hierarchical clustering is…

机器学习 · 计算机科学 2025-07-15 Shijie Li , Weiqiang He , Ruobing Bai , Pan Peng

Symmetries in a network connectivity regulate how the graph's functioning organizes into clustered states. Classical methods for tracing the symmetry group of a network require very high computational costs, and therefore they are of hard,…

Motivated by applications in community detection and dense subgraph discovery, we consider new clustering objectives in hypergraphs and bipartite graphs. These objectives are parameterized by one or more resolution parameters in order to…

数据结构与算法 · 计算机科学 2020-06-22 Nate Veldt , Anthony Wirth , David F. Gleich

We introduce fast algorithms for correlation clustering with respect to the Min Max objective that provide constant factor approximations on complete graphs. Our algorithms are the first purely combinatorial approximation algorithms for…

数据结构与算法 · 计算机科学 2023-01-31 Sami Davies , Benjamin Moseley , Heather Newman

Hierarchical multi-granularity classification (HMC) assigns hierarchical multi-granularity labels to each object and focuses on encoding the label hierarchy, e.g., ["Albatross", "Laysan Albatross"] from coarse-to-fine levels. However, the…

计算机视觉与模式识别 · 计算机科学 2022-01-12 Jingzhou Chen , Peng Wang , Jian Liu , Yuntao Qian

Most of the research on clustering ensemble focuses on designing practical consistency learning algorithms.To solve the problems that the quality of base clusters varies and the low-quality base clusters have an impact on the performance of…

机器学习 · 计算机科学 2024-11-04 Jianwen Gan , Yan Chen , Peng Zhou , Liang Du

Large-scale L1-regularized loss minimization problems arise in high-dimensional applications such as compressed sensing and high-dimensional supervised learning, including classification and regression problems. High-performance algorithms…

机器学习 · 统计学 2012-12-19 Chad Scherrer , Ambuj Tewari , Mahantesh Halappanavar , David Haglin

While there has been much interest in adapting conventional clustering procedures---and in higher dimensions, persistent homology methods---to directed networks, little is known about the convergence of such methods. In order to even…

计算几何 · 计算机科学 2022-12-20 Samir Chowdhury , Facundo Mémoli

High-order clustering aims to identify heterogeneous substructures in multiway datasets that arise commonly in neuroimaging, genomics, social network studies, etc. The non-convex and discontinuous nature of this problem pose significant…

统计方法学 · 统计学 2022-10-11 Rungang Han , Yuetian Luo , Miaoyan Wang , Anru R. Zhang

Motivation: Clustering is a frequently used concept in variety of bioinformatical applications. We present a new method for hierarchical clustering of data called mutual information clustering (MIC) algorithm. It uses mutual information…

定量方法 · 定量生物学 2007-05-23 Alexander Kraskov , Harald Stögbauer , Ralph G. Andrzejak , Peter Grassberger

In correlation clustering, we are given $n$ objects together with a binary similarity score between each pair of them. The goal is to partition the objects into clusters so to minimise the disagreements with the scores. In this work we…

机器学习 · 计算机科学 2020-01-15 Marco Bressan , Nicolò Cesa-Bianchi , Andrea Paudice , Fabio Vitale

We consider the problem of constructing an an optimal-weight tree from the 3*(n choose 4) weighted quartet topologies on n objects, where optimality means that the summed weight of the embedded quartet topologiesis optimal (so it can be the…

数据结构与算法 · 计算机科学 2011-11-09 Rudi Cilibrasi , Paul M. B. Vitanyi