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A new method for the analysis of the scattering rates from angle-resolved photoelectron spectroscopy (ARPES) is presented and described in details. It takes into account experimental instrumental resolution and finite temperature effects.…

强关联电子 · 物理学 2022-02-04 R. Kurleto , J. Fink

A method is described for the reconstruction of the amplitude and phase of the object exit wave function by phase-plate transmission electron microscopy. The proposed method can be considered as in-line holography and requires three images,…

材料科学 · 物理学 2017-05-24 B. Gamm , M. Dries , K. Schultheiss , H. Blank , A. Rosenauer , R. R. Schröder , D. Gerthsen

We present Frequency Marching, FM, an algorithm that refines three-dimensional electron density distributions from solution X-ray scattering data in both the small- and wide-angle regimes. This algorithm is based on a series of optimization…

生物物理 · 物理学 2020-12-25 Yen-Lin Chen , Lois Pollack

We give uniqueness theorem and reconstruction algorithm for the nonlinearized problem of finding the dielectric anisotropy f of the medium from non-overdetermined polarization tomography data. We assume that the medium has uniform…

数学物理 · 物理学 2015-05-13 Roman Novikov

A method for the analysis of superresolution microscopy images is presented. This method is based on the analysis of stochastic trajectories of particles moving on the membrane of a cell with the assumption that this motion is determined by…

最优化与控制 · 数学 2023-11-09 Mario Annunziato , Alfio Borzì

Understanding the electron beam distribution in the longitudinal phase space (LPS) is crucial for free electron laser (FEL) facilities. Conventionally, LPS diagnostics utilize radio frequency (RF) deflecting structures to streak the…

加速器物理 · 物理学 2026-05-28 Sergey Tomin , Igor Zagorodnov

In this work, a numerical modal decomposition approach is applied to model the optical field of laser light after propagating through a highly multi-mode fiber. The algorithm for the decomposition is based on the reconstruction of measured…

光学 · 物理学 2020-10-20 Hao Pang , Tobias Haecker , Alexandre Bense , Tobias Haist , Daniel Flamm

Reconstruction of a quantum state is of prime importance for quantum-information science. Specifically, means of efficient determination of a state of atoms of room-temperature vapor may enable applications in quantum computations and…

量子物理 · 物理学 2022-09-07 Marek Kopciuch , Szymon Pustelny

X-ray as well as electron diffraction are powerful tools for structure determination of molecules. Studies on randomly oriented molecules in the gas-phase address cases in which molecular crystals cannot be generated or the interaction-free…

Anisotropic two-dimensional diffraction signals encode additional structural information, including atom-pair angular distributions, beyond conventional isotropic scattering. However, experimental constraints such as beam stops result in…

化学物理 · 物理学 2026-04-06 Yanwei Xiong , Martin Centurion

We consider deflection of rotating symmetric molecules by inhomogeneous optical and static electric fields, compare results with the case of linear molecules, and find new singularities in the distribution of the scattering angle.…

化学物理 · 物理学 2015-05-28 Erez Gershnabel , Ilya Sh. Averbukh

Coarse-grained (CG) molecular dynamics simulations enable efficient exploration of protein conformational ensembles. However, reconstructing atomic details from CG structures (backmapping) remains a challenging problem. Current approaches…

机器学习 · 计算机科学 2025-12-30 Xu Han , Yuancheng Sun , Kai Chen , Yuxuan Ren , Kang Liu , Qiwei Ye

The Cryo-EM 3D particle reconstruction is essential for identifying protein and uncover the biological mechanism of the macro-molecules. In this paper, we use Kam method for reconstruction. Kam method is \textit{ab-initio}, and it assumes…

定量方法 · 定量生物学 2019-06-21 Yin Xian

We theoretically demonstrate a scheme for tomographic reconstruction of asymmetric molecular orbitals based on high-order harmonic generation with a two-color multicycle laser field. It is shown that by adjusting the relative phase of the…

原子物理 · 物理学 2013-12-30 Meiyan Qin , Xiaosong Zhu , Qingbin Zhang , Peixiang Lu

We present a detailed model of the discrete X-ray spectroscopic features expected from steady-state, low-density photoionized plasmas. We apply the Flexible Atomic Code (FAC) to calculate all of the necessary atomic data for the full range…

天体物理学 · 物理学 2007-05-23 A. Kinkhabwala , E. Behar , M. Sako , M. F. Gu , S. M. Kahn , F. B. S. Paerels

We study ionization dynamics of aligned diatomic molecules N$_2$ in strong elliptical laser fields experimentally and theoretically. The alignment dependence of photoelectron momentum distributions (PMDs) of N$_2$ measured in experiments is…

We present a MATLAB package for reconstructing sound-speed images from transmission ultrasound data. The package is based on two-point ray tracing and implements two complementary inversion strategies for image reconstruction. The first is…

数值分析 · 数学 2025-11-25 Ashkan Javaherian

Fluorescence molecular tomography (FMT) is a sensitive optical imaging technology widely used in biomedical research. However, the ill-posedness of the inverse problem poses a huge challenge to FMT reconstruction. Although end-to-end deep…

图像与视频处理 · 电气工程与系统科学 2025-03-18 Peng Zhang , Qianqian Xue , Xingyu Liu , Guanglei Zhang , Wenjian Wang , Jiye Liang

To obtain an electron-density map from a macromolecular crystal the phase-problem needs to be solved, which often involves the use of heavy-atom derivative crystals and concomitantly the determination of the heavy atom substructure. This is…

生物大分子 · 定量生物学 2018-08-20 Bjørn Panyella Pedersen , Pontus Gourdon , Xiangyu Liu , Jesper Lykkegaard Karlsen , Poul Nissen

Conventional photoemission orbital tomography based on Fourier iterative method enables us to extract a projected two-dimensional (2D) molecular orbital from a 2D photoelectron momentum map (PMM) of planar $\pi$-conjugated molecules in a…

材料科学 · 物理学 2024-03-01 Misa Nozaki , Takehisa Konishi