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Ordinary differential equation models are used to describe dynamic processes across biology. To perform likelihood-based parameter inference on these models, it is necessary to specify a statistical process representing the contribution of…

Temporal data such as time series can be viewed as discretized measurements of the underlying function. To build a generative model for such data we have to model the stochastic process that governs it. We propose a solution by defining the…

机器学习 · 计算机科学 2023-05-22 Marin Biloš , Kashif Rasul , Anderson Schneider , Yuriy Nevmyvaka , Stephan Günnemann

Exploiting the information provided by the molecular noise of a biological process has proven to be valuable in extracting knowledge about the underlying kinetic parameters and sources of variability from single cell measurements. However,…

定量方法 · 定量生物学 2013-08-30 Jakob Ruess , Andreas Milias-Argeitis , John Lygeros

This chapter presents specific aspects of Gaussian process modeling in the presence of complex noise. Starting from the standard homoscedastic model, various generalizations from the literature are presented: input varying noise variance,…

最优化与控制 · 数学 2024-12-11 Mickael Binois , Arindam Fadikar , Abby Stevens

System identification is of special interest in science and engineering. This article is concerned with a system identification problem arising in stochastic dynamic systems, where the aim is to estimate the parameters of a system along…

统计方法学 · 统计学 2022-01-27 Christos Merkatas , Simo Särkkä

Diffusion models have attracted a lot of attention in recent years. These models view speech generation as a continuous-time process. For efficient training, this process is typically restricted to additive Gaussian noising, which is…

机器学习 · 计算机科学 2025-10-14 Xiaozhou Tan , Minghui Zhao , Anton Ragni

This paper considers the problem of estimating linear dynamic system models when the observations are corrupted by random disturbances with nonstandard distributions. The paper is particularly motivated by applications where sensor…

统计方法学 · 统计学 2018-07-09 Johan Dahlin , Adrian Wills , Brett Ninness

Time-series forecasting remains difficult in real-world settings because temporal patterns operate at multiple scales, from broad contextual trends to fast, fine-grained fluctuations that drive critical decisions. Existing neural models…

机器学习 · 计算机科学 2025-11-26 Sepideh Koohfar

The noise of signals or currents consisting from a sequence of pulses, elementary events or moving discrete objects (particles) is analyzed. A simple analytically solvable model is investigated in detail both analytically and numerically.…

adap-org · 物理学 2009-10-30 B. Kaulakys , T. Meskauskas

Modeling real-world systems requires accounting for noise - whether it arises from unpredictable fluctuations in financial markets, irregular rhythms in biological systems, or environmental variability in ecosystems. While the behavior of…

Oscillatory systems arise in the different science fields. Complex mathematical formulations with differential equations have been proposed to model the dynamics of these systems. While they have the advantage of having a direct…

神经元与认知 · 定量生物学 2022-05-02 Cristina Rueda , Alejandro Rodríguez-Collado , Yolanda Larriba

We introduce the concept of numerical Gaussian processes, which we define as Gaussian processes with covariance functions resulting from temporal discretization of time-dependent partial differential equations. Numerical Gaussian processes,…

机器学习 · 统计学 2017-03-31 Maziar Raissi , Paris Perdikaris , George Em Karniadakis

A low-complexity model for signal quality prediction in a nonlinear fiber-optical network is developed. The model, which builds on the Gaussian noise model, takes into account the signal degradation caused by a combination of chromatic…

光学 · 物理学 2015-01-07 Pontus Johannisson , Erik Agrell

Noise is an unavoidable part of most measurements which can hinder a correct interpretation of the data. Uncertainties propagate in the data analysis and can lead to biased results even in basic descriptive statistics such as the central…

天体物理仪器与方法 · 物理学 2023-11-27 Lorenzo Rimoldini

Empirical time series often contain observational noise. We investigate the effect of this noise on the estimated parameters of models fitted to the data. For data of physiological tremor, i.e. a small amplitude oscillation of the…

chao-dyn · 物理学 2015-06-24 J. Timmer

It is a common practice in the machine learning community to assume that the observed data are noise-free in the input attributes. Nevertheless, scenarios with input noise are common in real problems, as measurements are never perfectly…

A modelling framework, based on the theory of signal processing, for characterising the dynamics of systems driven by the unravelling of information is outlined, and is applied to describe the process of decision making. The model input of…

理论经济学 · 经济学 2022-04-14 Dorje C. Brody

Procedural noise is a fundamental component of computer graphics pipelines, offering a flexible way to generate textures that exhibit "natural" random variation. Many different types of noise exist, each produced by a separate algorithm. In…

We introduce a signal processing model for signals in non-white noise, where the exact noise spectrum is a priori unknown. The model is based on a Student's t distribution and constitutes a natural generalization of the widely used normal…

统计方法学 · 统计学 2015-03-13 Christian Röver , Renate Meyer , Nelson Christensen

What happens to the optimal interpretation of noisy data when there exists more than one equally plausible interpretation of the data? In a Bayesian model-learning framework the answer depends on the prior expectations of the dynamics of…

其他定量生物学 · 定量生物学 2007-05-23 Gurinder Singh Atwal , William Bialek
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