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Adverse reaction caused by drugs is a potentially dangerous problem which may lead to mortality and morbidity in patients. Adverse Drug Event (ADE) extraction is a significant problem in biomedical research. We model ADE extraction as a…

计算与语言 · 计算机科学 2018-01-03 Suriyadeepan Ramamoorthy , Selvakumar Murugan

The objective of our work is to demonstrate the feasibility of utilizing deep learning models to extract safety signals related to the use of dietary supplements (DS) in clinical text. Two tasks were performed in this study. For the named…

信息检索 · 计算机科学 2020-11-24 Yadan Fan , Sicheng Zhou , Yifan Li , Rui Zhang

Adverse drug events (ADEs) are unexpected incidents caused by the administration of a drug or medication. To identify and extract these events, we require information about not just the drug itself but attributes describing the drug (e.g.,…

计算与语言 · 计算机科学 2021-04-23 Darshini Mahendran , Bridget T. McInnes

Background: Identifying relationships between clinical events and temporal expressions is a key challenge in meaningfully analyzing clinical text for use in advanced AI applications. While previous studies exist, the state-of-the-art…

计算与语言 · 计算机科学 2020-04-15 Hong Guan , Jianfu Li , Hua Xu , Murthy Devarakonda

This paper presents our approach for task 2 and task 3 of Social Media Mining for Health (SMM4H) 2020 shared tasks. In task 2, we have to differentiate adverse drug reaction (ADR) tweets from nonADR tweets and is treated as binary…

计算与语言 · 计算机科学 2020-06-30 Katikapalli Subramanyam Kalyan , S. Sangeetha

Named entity recognition often fails in idiosyncratic domains. That causes a problem for depending tasks, such as entity linking and relation extraction. We propose a generic and robust approach for high-recall named entity recognition. Our…

计算与语言 · 计算机科学 2016-08-25 Sebastian Arnold , Felix A. Gers , Torsten Kilias , Alexander Löser

Adverse drug reactions (ADRs) are unwanted or harmful effects experienced after the administration of a certain drug or a combination of drugs, presenting a challenge for drug development and drug administration. In this paper, we present a…

计算与语言 · 计算机科学 2019-05-29 Maksim Belousov , Nikola Milosevic , William Dixon , Goran Nenadic

Physicians learn primarily about illicit drugs from clinical overdose cases, limiting their understanding of real-world usage. Meanwhile, drug users share first-hand experiences online, offering insights into dosage and effects of drugs. To…

计算与语言 · 计算机科学 2026-05-27 Zewei Wang , Zihan Xu , Yishu Wei , Michael Chary , Yifan Peng

Adverse event (AE) extraction following COVID-19 vaccines from text data is crucial for monitoring and analyzing the safety profiles of immunizations. Traditional deep learning models are adept at learning intricate feature representations…

计算与语言 · 计算机科学 2024-06-27 Yiming Li , Deepthi Viswaroopan , William He , Jianfu Li , Xu Zuo , Hua Xu , Cui Tao

Adverse Drug Event (ADE) extraction models can rapidly examine large collections of social media texts, detecting mentions of drug-related adverse reactions and trigger medical investigations. However, despite the recent advances in NLP, it…

计算与语言 · 计算机科学 2021-09-27 Simone Scaboro , Beatrice Portelli , Emmanuele Chersoni , Enrico Santus , Giuseppe Serra

We study the problem of detecting adverse drug events in electronic healthcare records. The challenge in this work is to aggregate heterogeneous data types involving diagnosis codes, drug codes, as well as lab measurements. An earlier…

机器学习 · 计算机科学 2019-07-16 Maria Bampa , Panagiotis Papapetrou

Adverse drug events (ADEs) are an important aspect of drug safety. Various texts such as biomedical literature, drug reviews, and user posts on social media and medical forums contain a wealth of information about ADEs. Recent studies have…

计算与语言 · 计算机科学 2024-05-21 Shaoxiong Ji , Ya Gao , Pekka Marttinen

In this work, we present the first corpus for German Adverse Drug Reaction (ADR) detection in patient-generated content. The data consists of 4,169 binary annotated documents from a German patient forum, where users talk about health issues…

计算与语言 · 计算机科学 2022-08-04 Lisa Raithel , Philippe Thomas , Roland Roller , Oliver Sapina , Sebastian Möller , Pierre Zweigenbaum

Early identification of Adverse Drug Events (ADE) is critical for taking prompt actions while introducing new drugs into the market. These ADEs information are available through various unstructured data sources like clinical study reports,…

计算与语言 · 计算机科学 2024-12-23 Vinayak Arannil , Tomal Deb , Atanu Roy

Automatic monitoring of adverse drug events (ADEs) or reactions (ADRs) is currently receiving significant attention from the biomedical community. In recent years, user-generated data on social media has become a valuable resource for this…

计算与语言 · 计算机科学 2023-11-21 Ilseyar Alimova , Elena Tutubalina

Lawyers and judges spend a large amount of time researching the proper legal authority to cite while drafting decisions. In this paper, we develop a citation recommendation tool that can help improve efficiency in the process of opinion…

信息检索 · 计算机科学 2021-06-22 Zihan Huang , Charles Low , Mengqiu Teng , Hongyi Zhang , Daniel E. Ho , Mark S. Krass , Matthias Grabmair

The automation of adverse drug reaction (ADR) detection in social media would revolutionize the practice of pharmacovigilance, supporting drug regulators, the pharmaceutical industry and the general public in ensuring the safety of the…

计算与语言 · 计算机科学 2020-05-15 Amy Breden , Lee Moore

In recent years, Internet users are reporting Adverse Drug Events (ADE) on social media, blogs and health forums. Because of the large volume of reports, pharmacovigilance is seeking to resort to NLP to monitor these outlets. We propose for…

计算与语言 · 计算机科学 2021-05-20 Beatrice Portelli , Daniele Passabì , Edoardo Lenzi , Giuseppe Serra , Enrico Santus , Emmanuele Chersoni

In this study, we establish a benchmark for adverse drug event (ADE) detection in Dutch clinical free-text documents using several transformer models, clinical scenarios, and fit-for-purpose performance measures. We trained a Bidirectional…

Monitoring the administration of drugs and adverse drug reactions are key parts of pharmacovigilance. In this paper, we explore the extraction of drug mentions and drug-related information (reason for taking a drug, route, frequency,…

计算与语言 · 计算机科学 2019-09-24 Maksim Belousov , Nikola Milosevic , Ghada Alfattni , Haifa Alrdahi , Goran Nenadic
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