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相关论文: An Improved Sketching Algorithm for Edit Distance

200 篇论文

We adapt a well known streaming algorithm for approximating item frequencies to the matrix sketching setting. The algorithm receives the rows of a large matrix $A \in \R^{n \times m}$ one after the other in a streaming fashion. It maintains…

数据结构与算法 · 计算机科学 2012-07-12 Edo Liberty

Suppose that a transmitter Alice potentially wishes to communicate with a receiver Bob over an adversarially jammed binary channel. An active adversary James eavesdrops on their communication over a binary symmetric channel (BSC(q)), and…

信息论 · 计算机科学 2021-06-25 Qiaosheng Zhang , Mayank Bakshi , Sidharth Jaggi

We study approximation algorithms for the following three string measures that are widely used in practice: edit distance (ED), longest common subsequence (LCS), and longest increasing sequence (LIS). All three problems can be solved…

数据结构与算法 · 计算机科学 2020-07-28 Kuan Cheng , Zhengzhong Jin , Xin Li , Yu Zheng

Recent advancement of the WWW, IOT, social network, e-commerce, etc. have generated a large volume of data. These datasets are mostly represented by high dimensional and sparse datasets. Many fundamental subroutines of common data analytic…

信息检索 · 计算机科学 2019-10-11 Rameshwar Pratap , Debajyoti Bera , Karthik Revanuru

In this paper, we present a novel heuristic algorithm for the stable but NP-complete deformation-based edit distance on merge trees. Our key contribution is the introduction of a user-controlled look-ahead parameter that allows to trade off…

计算几何 · 计算机科学 2025-01-13 Florian Wetzels , Heike Leitte , Christoph Garth

Information distances like the Hellinger distance and the Jensen-Shannon divergence have deep roots in information theory and machine learning. They are used extensively in data analysis especially when the objects being compared are high…

数据结构与算法 · 计算机科学 2015-03-19 Amirali Abdullah , Ravi Kumar , Andrew McGregor , Sergei Vassilvitskii , Suresh Venkatasubramanian

Large-scale distributed training of neural networks is often limited by network bandwidth, wherein the communication time overwhelms the local computation time. Motivated by the success of sketching methods in sub-linear/streaming…

机器学习 · 计算机科学 2020-01-24 Nikita Ivkin , Daniel Rothchild , Enayat Ullah , Vladimir Braverman , Ion Stoica , Raman Arora

Simultaneous dense coding guarantees that Bob and Charlie simultaneously receive their respective information from Alice in their respective processes of dense coding. The idea is to use the so-called locking operation to "lock" the…

量子物理 · 物理学 2016-02-24 Haozhen Situ , Daowen Qiu , Paulo Mateus , Nikola Paunković

Edit distance similarity search, also called approximate pattern matching, is a fundamental problem with widespread database applications. The goal of the problem is to preprocess $n$ strings of length $d$, to quickly answer queries $q$ of…

数据结构与算法 · 计算机科学 2020-07-10 Samuel McCauley

There are efficient dynamic programming solutions to the computation of the Edit Distance from $S\in[1..\sigma]^n$ to $T\in[1..\sigma]^m$, for many natural subsets of edit operations, typically in time within $O(nm)$ in the worst-case over…

信息检索 · 计算机科学 2018-06-13 Jérémy Barbay , Andrés Olivares

In interactive coding, Alice and Bob wish to compute some function $f$ of their individual private inputs $x$ and $y$. They do this by engaging in a non-adaptive (fixed order, fixed length) protocol to jointly compute $f(x,y)$. The goal is…

数据结构与算法 · 计算机科学 2021-11-09 Meghal Gupta , Rachel Yun Zhang

We present the first dynamic algorithms for Dyck and tree edit distances with subpolynomial update times. Dyck edit distance measures how far a parenthesis string is from a well-parenthesized expression, while tree edit distance quantifies…

数据结构与算法 · 计算机科学 2025-10-21 Debarati Das , Jacob Gilbert , MohammadTaghi Hajiaghayi , Tomasz Kociumaka , Barna Saha

Approximate Pattern Matching is among the most fundamental string-processing tasks. Given a text $T$ of length $n$, a pattern $P$ of length $m$, and a threshold $k$, the task is to identify the fragments of $T$ that are at distance at most…

数据结构与算法 · 计算机科学 2024-10-10 Tomasz Kociumaka , Jakob Nogler , Philip Wellnitz

The (unweighted) tree edit distance problem for $n$ node trees asks to compute a measure of dissimilarity between two rooted trees with node labels. The current best algorithm from more than a decade ago runs in $O(n ^ 3)$ time [Demaine,…

数据结构与算法 · 计算机科学 2021-11-12 Xiao Mao

In this paper, we address the problem of learning compact similarity-preserving embeddings for massive high-dimensional streams of data in order to perform efficient similarity search. We present a new online method for computing binary…

机器学习 · 计算机科学 2018-02-12 Anne Morvan , Antoine Souloumiac , Cédric Gouy-Pailler , Jamal Atif

We undertake a systematic study of sketching a quadratic form: given an $n \times n$ matrix $A$, create a succinct sketch $\textbf{sk}(A)$ which can produce (without further access to $A$) a multiplicative $(1+\epsilon)$-approximation to…

数据结构与算法 · 计算机科学 2026-02-23 Alexandr Andoni , Jiecao Chen , Robert Krauthgamer , Bo Qin , David P. Woodruff , Qin Zhang

The minimum distance of a code is an important concept in information theory. Hence, computing the minimum distance of a code with a minimum computational cost is a crucial process to many problems in this area. In this paper, we present…

信息论 · 计算机科学 2024-05-01 Fernando Hernando , Francisco D. Igual , Gregorio Quintana-Ortí

In this paper we improve the approximation ratio for the problem of scheduling packets on line networks with bounded buffers, where the aim is that of maximizing the throughput. Each node in the network has a local buffer of bounded size…

数据结构与算法 · 计算机科学 2020-09-30 Guy Even , Moti Medina , Adi Rosén

Measuring the distances between vertices on graphs is one of the most fundamental components in network analysis. Since finding shortest paths requires traversing the graph, it is challenging to obtain distance information on large graphs…

社会与信息网络 · 计算机科学 2019-02-12 Hongyang Zhang , Huacheng Yu , Ashish Goel

Recently, many streaming algorithms have utilized generalizations of the fact that the expected maximum distance of any $4$-wise independent random walk on a line over $n$ steps is $O(\sqrt{n})$. In this paper, we show that $4$-wise…

概率论 · 数学 2020-09-04 Shyam Narayanan