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Automatic detection and segmentation of objects in 2D and 3D microscopy data is important for countless biomedical applications. In the natural image domain, spatial embedding-based instance segmentation methods are known to yield…

图像与视频处理 · 电气工程与系统科学 2021-04-30 Manan Lalit , Pavel Tomancak , Florian Jug

Recently a category of tracking methods based on "tracking-by-detection" is widely used in visual tracking problem. Most of these methods update the classifier online using the samples generated by the tracker to handle the appearance…

计算机视觉与模式识别 · 计算机科学 2019-03-20 Yuefeng Chen , Qing Wang

The living body is composed of innumerable fine and complex structures and although these structures have been studied in the past, a vast amount of information pertaining to them still remains unknown. When attempting to observe these…

Cells segmentation shows rapid growth in biology. Indeed, using the classical segmentation methods only is not enough to segment this type of images. In this manuscript, we will present a new method of ribosomes segmentation. A…

图像与视频处理 · 电气工程与系统科学 2021-01-14 Mariam El Oussini

Localizing the bronchoscope in real time is essential for ensuring intervention quality. However, most existing methods struggle to balance between speed and generalization. To address these challenges, we present BronchoTrack, an…

计算机视觉与模式识别 · 计算机科学 2024-02-21 Qingyao Tian , Huai Liao , Xinyan Huang , Bingyu Yang , Jinlin Wu , Jian Chen , Lujie Li , Hongbin Liu

Optimal curve methods provide a fundamental framework for tubular centerline tracking. Point-wise approaches, such as minimal paths, are theoretically elegant but often suffer from shortcut and short-branch combination problems in complex…

计算机视觉与模式识别 · 计算机科学 2026-01-23 Chong Di , Jinglin Zhang , Zhenjiang Li , Jean-Marie Mirebeau , Da Chen , Laurent D. Cohen

The path to interpreting a language model often proceeds via analysis of circuits -- sparse computational subgraphs of the model that capture specific aspects of its behavior. Recent work has automated the task of discovering circuits. Yet,…

计算与语言 · 计算机科学 2025-04-03 Adithya Bhaskar , Alexander Wettig , Dan Friedman , Danqi Chen

We describe the measurement of anisotropic viscoelastic moduli in complex soft materials, such as biopolymer gels, via video particle tracking microrheology of colloid tracer particles. The use of a correlation tensor to find the axes of…

软凝聚态物质 · 物理学 2007-05-23 I A Hasnain , A M Donald

Ultrasound localization microscopy offers new radiation-free diagnostic tools for vascular imaging deep within the tissue. Sequential localization of echoes returned from inert microbubbles with low-concentration within the bloodstream…

医学物理 · 物理学 2018-04-11 Oren Solomon , Ruud J. G. van Sloun , Hessel Wijkstra , Massimo Mischi , Yonina C. Eldar

3D single object tracking has been a crucial problem for decades with numerous applications such as autonomous driving. Despite its wide-ranging use, this task remains challenging due to the significant appearance variation caused by…

计算机视觉与模式识别 · 计算机科学 2023-03-10 Tian-Xing Xu , Yuan-Chen Guo , Yu-Kun Lai , Song-Hai Zhang

Fluorescence microscopy is an essential tool for the analysis of 3D subcellular structures in tissue. An important step in the characterization of tissue involves nuclei segmentation. In this paper, a two-stage method for segmentation of…

图像与视频处理 · 电气工程与系统科学 2020-01-10 David Joon Ho , Shuo Han , Chichen Fu , Paul Salama , Kenneth W. Dunn , Edward J. Delp

Cell tracking and segmentation assist biologists in extracting insights from large-scale microscopy time-lapse data. Driven by local accuracy metrics, current tracking approaches often suffer from a lack of long-term consistency and the…

计算机视觉与模式识别 · 计算机科学 2025-06-30 Timo Kaiser , Maximilian Schier , Bodo Rosenhahn

Methods: We have developed a software suite (DataSet Tracker) for real-time analysis designed to run on computers, smartphones, and smart glasses hardware and suitable for resource-constrained, on-the-fly computing in microscopes without…

定量方法 · 定量生物学 2025-08-13 Alexandre Matov

The precise tracking of micron sized colloidal particles - held in the vicinity of each other using optical tweezers - is an elegant way to gain information about the particle-particle pair interaction potential. The accuracy of the method,…

光学 · 物理学 2017-09-26 Chi Zhang , Georges Brügger , Frank Scheffold

Identification of vessel structures of different sizes in biomedical images is crucial in the diagnosis of many neurodegenerative diseases. However, the sparsity of good-quality annotations of such images makes the task of vessel…

The interest in the extracellular vesicles (EVs) is rapidly growing as they became reliable biomarkers for many diseases. For this reason, fast and accurate techniques of EVs size characterization are the matter of utmost importance. One…

生物物理 · 物理学 2018-03-26 M. Majka , M. Durak-Kozica , A. Kamińska , A. Opalińska , M. Szczęch , E. Stępień

Efficient and accurate particle tracking is crucial for measuring Standard Model parameters and searching for new physics. This task consists of two major computational steps: track finding, the identification of a subset of all hits that…

高能物理 - 实验 · 物理学 2025-09-16 Ryan Miller , Alexander Shmakov , Kyuho Oh , Jiwon Lee , Pierre Baldi , Levi Condren , Makayla Vessella , Daniel Whiteson

Current LiDAR point cloud-based 3D single object tracking (SOT) methods typically rely on point-based representation network. Despite demonstrated success, such networks suffer from some fundamental problems: 1) It contains pooling…

计算机视觉与模式识别 · 计算机科学 2024-08-06 Yuxuan Lu , Jiahao Nie , Zhiwei He , Hongjie Gu , Xudong Lv

We propose a novel algorithm for accelerating dense long-term 3D point tracking in videos. Through analysis of existing state-of-the-art methods, we identify two major computational bottlenecks. First, transformer-based iterative tracking…

计算机视觉与模式识别 · 计算机科学 2025-12-11 Tuan Duc Ngo , Ashkan Mirzaei , Guocheng Qian , Hanwen Liang , Chuang Gan , Evangelos Kalogerakis , Peter Wonka , Chaoyang Wang

Studies of social and group behavior in interacting organisms require high-throughput analysis of the motion of a large number of individual subjects. Computer vision techniques offer solutions to specific tracking problems, and allow…

定量方法 · 定量生物学 2015-06-12 Yi Deng , Philip Coen , Mingzhai Sun , Joshua W. Shaevitz