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Considerable scientific work involves locating, analyzing, systematizing, and synthesizing other publications. Its results end up in a paper's "background" section or in standalone articles, which include meta-analyses and systematic…

数字图书馆 · 计算机科学 2023-12-05 Diomidis Spinellis

In recent years, the research community has raised serious questions about the reproducibility of scientific work. In particular, since many studies include some kind of computing work, reproducibility is also a technological challenge, not…

软件工程 · 计算机科学 2023-08-03 Lázaro Costa , Susana Barbosa , Jácome Cunha

Although a standard in natural science, reproducibility has been only episodically applied in experimental computer science. Scientific papers often present a large number of tables, plots and pictures that summarize the obtained results,…

数字图书馆 · 计算机科学 2017-09-06 Fernando Chirigati , Rebecca Capone , Dennis Shasha , Remi Rampin , Juliana Freire

Computational reproducibility of scientific results, that is, the execution of a computational experiment (e.g., a script) using its original settings (data, code, etc.), should always be possible. However, reproducibility has become a…

人机交互 · 计算机科学 2025-04-15 Lázaro Costa , Susana Barbosa , Jácome Cunha

An essential part of research and scientific communication is researchers' ability to reproduce the results of others. While there have been increasing standards for authors to make data and code available, many of these files are hard to…

数字图书馆 · 计算机科学 2021-09-23 Layan Bahaidarah , Ethan Hung , Andreas F. De Melo Oliveira , Jyotsna Penumaka , Lukas Rosario , Ana Trisovic

The reproducibility of software environments is a critical concern in modern software engineering, with ramifications ranging from the effectiveness of collaboration workflows to software supply chain security and scientific…

软件工程 · 计算机科学 2026-01-21 Julien Malka , Stefano Zacchiroli , Théo Zimmermann

As software has become an integral part of scientific workflows, reproducible research practices must take it into account. In what way? Archiving source code is a necessary but insufficient condition. The ability to redeploy software…

软件工程 · 计算机科学 2021-12-09 Ludovic Courtès

Computational reproducibility is fundamental to scientific research, yet many published code supplements lack the necessary documentation to recreate their computational environments. While researchers increasingly share code alongside…

计算机与社会 · 计算机科学 2025-08-12 Lorraine Saju , Tobias Holtdirk , Meetkumar Pravinbhai Mangroliya , Arnim Bleier

Reproducibility of computational research is critical for ensuring transparency, reliability and reusability. Challenges with computational reproducibility have been documented in several fields, but healthcare discrete-event simulation…

其他定量生物学 · 定量生物学 2025-09-17 Amy Heather , Thomas Monks , Alison Harper , Navonil Mustafee , Andrew Mayne

Recent reproducibility case studies have raised concerns showing that much of the deposited research has not been reproducible. One of their conclusions was that the way data repositories store research data and code cannot fully facilitate…

数字图书馆 · 计算机科学 2020-06-18 Ana Trisovic , Philip Durbin , Tania Schlatter , Gustavo Durand , Sonia Barbosa , Danny Brooke , Mercè Crosas

The reproduction and replication of research results has become a major issue for a number of scientific disciplines. In computer science and related computational disciplines such as systems biology, the challenges closely revolve around…

软件工程 · 计算机科学 2017-07-31 Tom Crick , Benjamin A. Hall , Samin Ishtiaq

Computational methods have reshaped the landscape of modern biology. While the biomedical community is increasingly dependent on computational tools, the mechanisms ensuring open data, open software, and reproducibility are variably…

其他定量生物学 · 定量生物学 2020-07-28 Jaqueline J. Brito , Jun Li , Jason H. Moore , Casey S. Greene , Nicole A. Nogoy , Lana X. Garmire , Serghei Mangul

The reproduction and replication of novel results has become a major issue for a number of scientific disciplines. In computer science and related computational disciplines such as systems biology, the issues closely revolve around the…

软件工程 · 计算机科学 2014-09-17 Tom Crick , Benjamin A. Hall , Samin Ishtiaq

The pursuit of scientific knowledge strongly depends on the ability to reproduce and validate research results. It is a well-known fact that the scientific community faces challenges related to transparency, reliability, and the…

数字图书馆 · 计算机科学 2023-08-29 Michael Canesche , Roland Leissa , Fernando Magno Quintão Pereira

Being able to duplicate published research results is an important process of conducting research whether to build upon these findings or to compare with them. This process is called "replicability" when using the original authors'…

数字图书馆 · 计算机科学 2020-05-07 Nicolas Bonneel , David Coeurjolly , Julie Digne , Nicolas Mellado

Research must be reproducible in order to make an impact on science and to contribute to the body of knowledge in our field. Yet studies have shown that 70% of research from academic labs cannot be reproduced. In software engineering, and…

软件工程 · 计算机科学 2018-04-10 Clinton Woodson , Jane Huffman Hayes , Sarah Griffioen

Data analysis in fundamental sciences nowadays is an essential process that pushes frontiers of our knowledge and leads to new discoveries. At the same time we can see that complexity of those analyses increases fast due to a)~enormous…

数据分析、统计与概率 · 物理学 2016-01-20 Tatiana Likhomanenko , Alex Rogozhnikov , Alexander Baranov , Egor Khairullin , Andrey Ustyuzhanin

Many research groups aspire to make data and code FAIR and reproducible, yet struggle because the data and code life cycles are disconnected, executable environments are often missing from published work, and technical skill requirements…

This paper investigates the reproducibility of computational science research and identifies key challenges facing the community today. It is the result of the First Summer School on Experimental Methodology in Computational Science…

Reproducibility, the ability to reproduce the results of published papers or studies using their computer code and data, is a cornerstone of reliable scientific methodology. Studies where results cannot be reproduced by the scientific…

应用统计 · 统计学 2022-10-03 Xin Xiong , Ivor Cribben
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