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Species or population that proliferate faster than others become dominant in numbers. Catalysis allows catalytic sets within a molecular reaction network to dominate the non catalytic parts of the network by processing most of the available…

细胞行为 · 定量生物学 2016-08-31 Rudolf Hanel

Relations among species in ecosystems can be represented by complex networks where both negative (competition) and positive (mutualism) interactions are concurrently present. Recently, it has been shown that many ecosystems can be cast into…

物理与社会 · 物理学 2017-03-20 Carlos Gracia-Lázaro , Laura Hernández , Javier Borge-Holthoefer , Yamir Moreno

In this paper, we consider a two-player two-strategy game with random payoffs in a population subdivided into $d$ demes, each containing $N$ individuals at the beginning of any given generation and experiencing local extinction and…

种群与进化 · 定量生物学 2023-11-02 Dhaker Kroumi , Sabin Lessard

We demonstrate diversification rather than optimisation for highly interacting organisms in a well mixed biological system by means of a simple model and reference to experiment, and find the cause to be the complex network of interactions…

种群与进化 · 定量生物学 2007-05-23 Daniel Lawson , Henrik Jeldtoft Jensen , Kunihiko Kaneko

When three species compete cyclically in a well-mixed, stochastic system of $N$ individuals, extinction is known to typically occur at times scaling as the system size $N$. This happens, for example, in rock-paper-scissors games or…

物理与社会 · 物理学 2019-02-20 Kevin E. Bassler , Erwin Frey , R. K. P. Zia

In ecological studies of pattern formation, models of the competitive-diffusion type are generally singularly perturbed, and the numerical approximation of such models is challenging. In this paper, we present finite element discretization…

数值分析 · 数学 2026-04-15 Xianping Li , Woinshet D. Mergia , Kailash C. Patidar

Many complex adaptive systems contain a large diversity of specialized components. The specialization at the level of the microscopic degrees of freedom, and diversity at the level of the system as a whole are phenomena that appear during…

adap-org · 物理学 2007-05-23 Vivek S. Borkar , Sanjay Jain , Govindan Rangarajan

Modelling the dynamics of dense granular media is a long standing challenge and essential to many natural phenomena and technological applications. Here, we trace back puzzling experimental observation of detailed-balanced steady states to…

软凝聚态物质 · 物理学 2024-10-29 Clara C. Wanjura , Amelie Mayländer , Othmar Marti , Raphael Blumenfeld

We consider a mutation-selection model of a population structured by the spatial variables and a trait variable which is the diffusion rate. Competition for resource is local in spatial variables, but nonlocal in the trait variable. We…

偏微分方程分析 · 数学 2020-04-20 King-Yeung Lam , Yuan Lou

Population-level scaling in ecological systems arises from individual growth and death with competitive constraints. We build on a minimal dynamical model of metabolic growth where the tension between individual growth and mortality…

种群与进化 · 定量生物学 2022-05-11 Edward D. Lee , Christopher P. Kempes , Geoffrey B. West

In natural ecosystems, species can be characterized by the nonlinear density-dependent self-regulation of their growth profile. Species of many taxa show a substantial density-dependent reduction for low population size. Nevertheless, many…

种群与进化 · 定量生物学 2025-06-26 Amit Samadder , Arnab Chattopadhyay , Anurag Sau , Sabyasachi Bhattacharya

Evolutionarily stable strategy (ESS) is an important solution concept in game theory which has been applied frequently to biological models. Informally an ESS is a strategy that if followed by the population cannot be taken over by a…

计算机科学与博弈论 · 计算机科学 2019-01-18 Sam Ganzfried

In this work we model the dynamics of a population that evolves as a continuous time branching process with a trait structure and ecological interactions in form of mutations and competition between individuals. We generalize existing…

概率论 · 数学 2020-10-19 Gabriel Berzunza , Anja Sturm , Anita Winter

Deterministic continuum models formulated in terms of non-local partial differential equations for the evolutionary dynamics of populations structured by phenotypic traits have been used recently to address open questions concerning the…

We study distributed agreement in microbial distributed systems under stochastic population dynamics and competitive interactions. Motivated by recent applications in synthetic biology, we examine how the presence and absence of direct…

分布式、并行与集群计算 · 计算机科学 2026-04-10 Victoria Andaur , Janna Burman , Matthias Függer , Manish Kushwaha , Bilal Manssouri , Thomas Nowak , Joel Rybicki

A simple model of species origin resulted from dynamic features of a population, solely, is developed. The model is based on the evolution optimality in space distribution, and the selection is gone over the mobility. Some biological issues…

种群与进化 · 定量生物学 2008-04-25 Michael G. Sadovsky

We present a mathematical model based on a system of partial differential equations (PDEs) with cross-diffusion and reaction terms to describe ecological interactions between multiple bacterial species and substrates within microaggregates,…

种群与进化 · 定量生物学 2025-12-16 Viktoria Freingruber , Rebeca Gonzalez-Cabaleiro , Havva Yoldaş

Spatially extended population dynamics models that incorporate intrinsic noise serve as case studies for the role of fluctuations and correlations in biological systems. Including spatial structure and stochastic noise in predator-prey…

统计力学 · 物理学 2018-01-09 Ulrich Dobramysl , Mauro Mobilia , Michel Pleimling , Uwe C. Täuber

In this paper we define a discrete dynamical system that governs the evolution of a population of agents. From the dynamical system, a variant of Differential Evolution is derived. It is then demonstrated that, under some assumptions on the…

计算工程、金融与科学 · 计算机科学 2016-11-17 Massimiliano Vasile , Edmondo Minisci , Marco Locatelli

In this paper, we study the propagation dynamics for a class of integrodifference competition models in a periodic habitat. An interesting feature of such a system is that multiple spreading speeds can be observed, which biologically means…

动力系统 · 数学 2017-12-22 Ruiwen Wu , Xiao-Qiang Zhao