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Stock and flow diagrams are widely used in epidemiology to model the dynamics of populations. Although tools already exist for building these diagrams and simulating the systems they describe, we have created a new package called StockFlow,…

计算机科学中的逻辑 · 计算机科学 2023-08-01 John Baez , Xiaoyan Li , Sophie Libkind , Nathaniel D. Osgood , Evan Patterson

This work establishes a robust mathematical foundation for compositional System Dynamics modeling, leveraging category theory to formalize and enhance the representation, analysis, and composition of system models. Here, System Dynamics…

系统与控制 · 电气工程与系统科学 2025-09-24 Xiaoyan Li , Evan Patterson , Patricia L. Mabry , Nathaniel D. Osgood

Stock and flow diagrams are already an important tool in epidemiology, but category theory lets us go further and treat these diagrams as mathematical entities in their own right. In this chapter we use communicable disease models created…

计算机科学中的逻辑 · 计算机科学 2024-12-12 John C. Baez , Xiaoyan Li , Sophie Libkind , Nathaniel D. Osgood , Eric Redekopp

We introduce and test the System Dynamics Bot, a computer program leveraging a large language model to automate the creation of causal loop diagrams from textual data. To evaluate its performance, we ensembled two distinct databases. The…

人机交互 · 计算机科学 2024-02-20 Niyousha Hosseinichimeh , Aritra Majumdar , Ross Williams , Navid Ghaffarzadegan

The growing complexity of decision-making in public health and health care has motivated an increasing use of mathematical modeling. An important line of health modeling is based on stock & flow diagrams. Such modeling elevates transparency…

计算机科学中的逻辑 · 计算机科学 2023-05-04 Nicholas Meadows , Xiaoyan Li , Nathaniel D Osgood

Causal diagrams are logic and graphical tools that depict assumptions about presumed causal relations. Such diagrams have proven effective in tackling a variety of problems in social sciences and epidemiology research yet remain foreign to…

应用统计 · 统计学 2023-06-29 M. Z. Naser

Transforming a dynamic hypothesis into a causal loop diagram (CLD) is crucial for System Dynamics Modelling. Extracting key variables and causal relationships from text to build a CLD is often challenging and time-consuming for novice…

机器学习 · 计算机科学 2025-03-31 Ning-Yuan Georgia Liu , David R. Keith

In this work, we introduce a new algorithm for analyzing a diagram, which contains visual and textual information in an abstract and integrated way. Whereas diagrams contain richer information compared with individual image-based or…

计算机视觉与模式识别 · 计算机科学 2017-11-28 Daesik Kim , Youngjoon Yoo , Jeesoo Kim , Sangkuk Lee , Nojun Kwak

Topology diagrams are widely seen in power system applications, but their automatic generation is often easier said than done. When facing power transmission systems with strongly-meshed structures, existing approaches can hardly produce…

系统与控制 · 电气工程与系统科学 2023-03-21 Jingyu Wang , Jinfu Chen , Dongyuan Shi , Xianzhong Duan

In this paper, we propose Continuous Graph Flow, a generative continuous flow based method that aims to model complex distributions of graph-structured data. Once learned, the model can be applied to an arbitrary graph, defining a…

机器学习 · 计算机科学 2019-10-01 Zhiwei Deng , Megha Nawhal , Lili Meng , Greg Mori

Graph generation generally aims to create new graphs that closely align with a specific graph distribution. Existing works often implicitly capture this distribution through the optimization of generators, potentially overlooking the…

机器学习 · 计算机科学 2024-07-19 Song Wang , Zhen Tan , Xinyu Zhao , Tianlong Chen , Huan Liu , Jundong Li

Understanding why models behave the way they do is critical to learning from them, and to conveying the insights they offer to a broad audience. The Loops that Matter methodology automatically shows which loops are dominating behavior at…

软件工程 · 计算机科学 2020-06-01 William Schoenberg , Robert Eberlein

Causal models capture cause-effect relations both qualitatively - via the graphical causal structure - and quantitatively - via the model parameters. They offer a powerful framework for analyzing and constructing processes. Here, we…

量子物理 · 物理学 2025-12-02 Ämin Baumeler , Stefan Wolf

Graphs are ubiquitous data structures for representing interactions between entities. With an emphasis on the use of graphs to represent chemical molecules, we explore the task of learning to generate graphs that conform to a distribution…

机器学习 · 计算机科学 2019-03-08 Qi Liu , Miltiadis Allamanis , Marc Brockschmidt , Alexander L. Gaunt

We show how every stock-flow consistent model of the macroeconomy can be represented as a directed acyclic graph. The advantages of representing the model in this way include graphical clarity, causal inference, and model specification. We…

经济学 · 定量金融 2014-09-17 Peter G. Fennell , David O'Sullivan , Antoine Godin , Stephen Kinsella

Graphs are used in many disciplines to model the relationships that exist between objects in a complex discrete system. Researchers may wish to compare a network of interest to a "typical" graph from a family (or ensemble) of graphs which…

组合数学 · 数学 2025-08-08 Catherine Greenhill

Deep generative models for graphs have exhibited promising performance in ever-increasing domains such as design of molecules (i.e, graph of atoms) and structure prediction of proteins (i.e., graph of amino acids). Existing work typically…

机器学习 · 计算机科学 2021-01-21 Wenbin Zhang , Liming Zhang , Dieter Pfoser , Liang Zhao

The use of generative AI to create text descriptions from graphs has mostly focused on knowledge graphs, which connect concepts using facts. In this work we explore the capability of large pretrained language models to generate text from…

计算与语言 · 计算机科学 2024-04-09 Atharva Phatak , Vijay K. Mago , Ameeta Agrawal , Aravind Inbasekaran , Philippe J. Giabbanelli

This paper contributes to speeding up the design and deployment of engineering dynamical systems by proposing a strategy for exploiting domain and expert knowledge for the automated generation of a dynamical system computational model…

计算与语言 · 计算机科学 2026-04-23 Matthew Anderson Hendricks , Alice Cicirello

Many production processes are characterized by numerous and complex cause-and-effect relationships. Since they are only partially known they pose a challenge to effective process control. In this work we present how Structural Equation…

机器学习 · 统计学 2022-10-27 Maximilian Kertel , Stefan Harmeling , Markus Pauly
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