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It is now well established that nearby beating pairs of eukaryotic flagella or cilia typically synchronize in phase. A substantial body of evidence supports the hypothesis that hydrodynamic coupling between the active filaments, combined…

软凝聚态物质 · 物理学 2016-10-12 Raymond E. Goldstein , Eric Lauga , Adriana I. Pesci , Michael R. E. Proctor

Evolution has provided many organisms with sophisticated sensory systems that enable them to respond to signals in their environment. The response frequently involves alteration in the pattern of movement, such as the chemokinesis of the…

分子网络 · 定量生物学 2009-11-10 Reka Albert , Yu-wen Chiu , Hans G. Othmer

Three-dimensional simulations with fully resolved hydrodynamics are performed to study the collective motion of model swimmers in confinement. We show that certain swimming mechanisms can lead to traveling wave-like collective motion even…

软凝聚态物质 · 物理学 2016-04-20 Norihiro Oyama , John Jairo Molina , Ryoichi Yamamoto

During the past century, biologists and mathematicians investigated two mechanisms underlying bacteria motion: the run phase during which bacteria move in straight lines and the tumble phase in which they change their orientation. When…

偏微分方程分析 · 数学 2025-05-19 Alain Blaustein

The mechanics of crawling cells on a substrate is investigated by using a minimal model that satisfies the force-free condition. A cell is described by two subcellular elements connected by a linear actuator that changes the length of the…

软凝聚态物质 · 物理学 2018-04-18 Mitsusuke Tarama , Ryoichi Yamamoto

Inspired by biology's use of vesicles for targeted transport, many studies have propelled liposomes with active matter, creating synthetic systems that can be viewed as microscale biohybrid robots. Nevertheless, the underlying motility…

It has long been believed that swimming eukaryotes feel solid boundaries through direct ciliary contact. Specifically, based on observations of behavior of green alga Chlamydomonas reinhardtii it has been reported that it is their "flagella…

流体动力学 · 物理学 2018-07-18 Mehdi Mirzakhanloo , Mohammad-Reza Alam

Although commonly associated with limbless animals like snakes and fish, multi-legged organisms like centipedes also utilize undulatory locomotion. Whether these undulations are actively reinforced or resisted by the axial musculature…

生物物理 · 物理学 2026-03-11 Adam Dionne , Fabio Giardina , L. Mahadevan

Synchronization plays a crucial role in the dynamics of living organisms, from fireflies flashing in unison to pacemaker cells that jointly generate heartbeats. Uncovering the mechanism behind these phenomena requires an understanding of…

适应与自组织系统 · 物理学 2024-05-16 Aleksandre Japaridze , Victor Struijk , Kushal Swamy , Irek Roslon , Oriel Shoshani , Cees Dekker , Farbod Alijani

Many eukaryotic cells use the active waving motion of flexible flagella to self-propel in viscous fluids. However, the criteria governing the selection of particular flagellar waveforms among all possible shapes has proved elusive so far.…

生物物理 · 物理学 2013-08-02 Christophe Eloy , Eric Lauga

Many biological microorganisms and artificial microswimmers react to external cues of environmental gradients by changing their swimming directions. We study here the behavior of eukarytic flagellated microswimmers in linear viscosity…

软凝聚态物质 · 物理学 2026-05-29 Shubham Anand , Jens Elgeti , Gerhard Gompper

Understanding principles of neurolocomotion requires the synthesis of neural activity, sensory feedback, and biomechanics. The nematode \textit{C. elegans} is an ideal model organism for studying locomotion in an integrated neuromechanical…

神经元与认知 · 定量生物学 2021-06-08 Carter L. Johnson , Timothy J. Lewis , Robert D. Guy

Micro-organisms usually can swim in their liquid environment by flagellar or ciliary beating. In this numerical work, we analyze the influence of flagellar beating on the orbits of a swimming cell in a shear flow. We also calculate the…

软凝聚态物质 · 物理学 2017-11-21 Levan Jibuti , Walter Zimmermann , Salima Rafaï , Philippe Peyla

The underwater traps of the carnivorous plants of the Utricularia species catch their preys through the repetition of an "active slow deflation / passive fast suction" sequence. In this paper, we propose a mechanical model that describes…

生物物理 · 物理学 2011-02-22 Marc Joyeux , Olivier Vincent , Philippe Marmottant

While hydrodynamic coupling has long been considered essential for synchronisation of eukaryotic flagella, recent experiments on the unicellular biflagellate model organism {\it Chlamydomonas} demonstrate that -- at the single cell level --…

生物物理 · 物理学 2025-04-04 Luc Zorrilla , Antoine Allard , Krish Desai , Marco Polin

The genome contains genetic information essential for cell's life. The genome's spatial organization inside the cell nucleus is critical for its proper function including gene regulation. The two major genomic compartments -- euchromatin…

软凝聚态物质 · 物理学 2026-04-24 S. Alex Rautu , Alexandra Zidovska , David Saintillan , Michael J. Shelley

Morphologies of a vesicle confined in a spherical vesicle were explored experimentally by fast confocal laser microscopy and numerically by a dynamically-triangulated membrane model with area-difference elasticity. The confinement was found…

软凝聚态物质 · 物理学 2014-04-08 Ai Sakashita , Masayuki Imai , Hiroshi Noguchi

The motility of eukaryotic cells is strongly influenced by their environment, with confined cells often developing qualitatively different motility patterns from those migrating on simple two-dimensional substrates. Recent experiments,…

细胞行为 · 定量生物学 2024-12-24 Pedrom Zadeh , Brian A. Camley

The natural habitats of microorganisms in the human microbiome and ocean and soil ecosystems are full of colloids and macromolecules, which impart non-Newtonian flow properties drastically affecting the locomotion of swimming…

软凝聚态物质 · 物理学 2022-04-01 Shashank Kamdar , Seunghwan Shin , Lorraine F. Francis , Xinliang Xu , Xiang Cheng

Motility is a fundamental feature of living matter, encompassing single cells and collective behavior. Such living systems are characterized by non-conservativity of energy and a large diversity of spatio-temporal patterns. Thus,…

软凝聚态物质 · 物理学 2023-10-25 Kenta Ishimoto , Clément Moreau , Kento Yasuda