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Numerical simulations are performed on a stochastic model based on Monte Carlo damage simulation process and Markov Chain Monte Carlo techniques to investigate the formation and evaluation of isolated and multiple DNA damage and cellular…

定量方法 · 定量生物学 2019-11-20 M. Loan , B. Freeman , A. Bhat , M. Tantary , M. Brown , K. Virk

(1) Background: RNA viruses and especially coronaviruses could act inside host cells not only by building their own proteins, but also by perturbing the cell metabolism. We show the possibility of miRNA-like inhibitions by the SARS-CoV-2…

基因组学 · 定量生物学 2020-08-04 Jacques Demongeot , Hervé Seligmann

The COVID-19 pandemic caused by the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has spurred unprecedented and concerted worldwide research to curtail and eradicate this pathogen. SARS-CoV-2 has four structural proteins:…

生物物理 · 物理学 2022-09-26 Siyu Li , Roya Zandi

The scientific community shows a great interest in the study of DNA damage induction, DNA damage repair and the biological effects on cells and cellular systems after exposure to ionizing radiation. Several in-silico methods have been…

An air cargo inspection system combining two nuclear reaction based techniques, namely Fast-Neutron Resonance Radiography and Dual-Discrete-Energy Gamma Radiography is currently being developed. This system is expected to allow detection of…

Due to the physical and chemical processes that are involved, interactions of ionizing radiations with cells lead to single- and double-strand breaks (SSB and DSB) and base damage to DNA cells. The damage may kill the cells or may be…

In December 2019, a newly discovered SARS-CoV-2 virus was emerged from China and propagated worldwide as a pandemic. In the absence of preventive medicine or a ready to use vaccine, mathematical models can provide useful scientific insights…

种群与进化 · 定量生物学 2020-06-30 Indrajit Ghosh

Nowadays, the current threat of international terrorism is set to a severe level, demanding worldwide enhanced security. Radioactive materials that could be fashioned into a radiation dispersal device typically emit gamma rays, while…

仪器与探测器 · 物理学 2017-11-16 A. Sh. Georgadze

Targeted Radionuclide Therapy (TRT) is a well-established technique for cancer treatment. In this approach, radionuclides are bound to specific drugs that selectively transport them to the tumor site. Within the ISOLPHARM project, a…

The Geant4-DNA project proposes to develop an open-source simulation software based and fully included in the general-purpose Geant4 Monte Carlo simulation toolkit. The main objective of this software is to simulate biological damages…

Quasi-monochromatic, high energy and highly polarized $\gamma$-ray beam sources based on Compton scattering of laser photons (LCS) on relativistic electrons have developed for the last few decades as established instruments for nuclear…

仪器与探测器 · 物理学 2022-11-11 Dan Filipescu

SARS-CoV-2 coronavirus infection is mediated by the binding of its spike protein to the angiotensin-converting enzyme 2 (ACE2), which plays a pivotal role in the renin-angiotensin system (RAS). The study of RAS dysregulation due to…

分子网络 · 定量生物学 2020-08-04 Fabrizio Pucci , Philippe Bogaerts , Marianne Rooman

For a high energy electron facility, the estimates of induced radioactivity in materials are of major importance to keep exposure to personnel and to the environment as low as reasonably achievable. In addition, an accurate prediction of…

仪器与探测器 · 物理学 2014-06-10 He Lijuan , Li Yuxiong , Yu Guobing , Ren Guangyi , Duan Zongjin

We used a multiscale model to study the damage caused by swift heavy ions in GaN. The model combines Monte Carlo and molecular dynamics simulations to analyze the material response to the excitation initiated by a projectile. We found that…

材料科学 · 物理学 2026-02-17 S. V. Moskalets , R. A. Rymzhanov , A. E. Volkov

We present a multi-scale simulation of early stage of DNA damages by the indirect action of hydroxyl ($^\bullet$OH) free radicals generated by electrons and protons. The computational method comprises of interfacing the Geant4-DNA Monte…

生物物理 · 物理学 2015-06-17 Ramin M. Abolfath , David J. Carlson , Zhe J. Chen , Ravinder Nath

The SARS-CoV-2 pandemic has added new urgency to the study of viral mechanisms of infection. But while vaccines offer a measure of protection against this specific outbreak, a new era of pandemics has been predicted. In addition to this,…

生物物理 · 物理学 2022-10-25 Betony Adams , Ilya Sinayskiy , Rienk van Grondelle , Francesco Petruccione

The outbreak of COVID-19 caused by SARS-CoV-2 has rapidly spread worldwide and has caused over 1,400,000 infections and 80,000 deaths. There are currently no drugs or vaccines with proven efficacy for its prevention and little knowledge was…

基因组学 · 定量生物学 2020-04-13 Zhi Liu , Jianwei Wang , Yuyu Xu , Mengchen Guo , Kai Mi , Rui Xu , Yang Pei , Qiangkun Zhang , Xiaoting Luan , Zhibin Hu , Xingyin Liu#

Most of the ongoing projects aimed at the development of specific therapies and vaccines against COVID-19 use the SARS-CoV-2 spike (S) protein as the main target [1-3]. The binding of the spike protein with the ACE2 receptor (ACE2) of the…

生物物理 · 物理学 2021-11-17 Claudia R. Arbeitman , Pablo Rojas , Pedro Ojeda-May , Martin E. Garcia

In this work, we apply the Monte Carlo wave packet method to study the ultrafast nuclear dynamics following inner-shell photoionization of N2 exposed to an ultrashort intense X-ray pulse. The photon energy of the X-ray pulse is large enough…

原子物理 · 物理学 2022-10-12 Qingli Jing , Hong Qian , Peng Xu

The large-scale evolution of the SARS-CoV-2 virus has been marked by rapid turnover of genetic clades. New variants show intrinsic changes, notably increased transmissibility, as well as antigenic changes that reduce the cross-immunity…

种群与进化 · 定量生物学 2022-07-20 Matthijs Meijers , Denis Ruchnewitz , Marta Łuksza , Michael Lässig
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