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Cell detection is an important task in biomedical research. Recently, deep learning methods have made it possible to improve the performance of cell detection. However, a detection network trained with training data under a specific…

计算机视觉与模式识别 · 计算机科学 2023-03-10 Hyeonwoo Cho , Kazuya Nishimura , Kazuhide Watanabe , Ryoma Bise

Multi-label classification (MLC) assigns multiple labels to each sample. Prior studies show that MLC can be transformed to a sequence prediction problem with a recurrent neural network (RNN) decoder to model the label dependency. However,…

机器学习 · 计算机科学 2019-09-10 Che-Ping Tsai , Hung-Yi Lee

Carcinoma is the prevailing type of cancer and can manifest in various body parts. It is widespread and can potentially develop in numerous locations within the body. In the medical domain, data for carcinoma cancer is often limited or…

计算机视觉与模式识别 · 计算机科学 2024-09-18 Kislay Raj , Teerath Kumar , Alessandra Mileo , Malika Bendechache

Multi-Label Text Classification (MLTC) aims to assign the most relevant labels to each given text. Existing methods demonstrate that label dependency can help to improve the model's performance. However, the introduction of label dependency…

计算与语言 · 计算机科学 2023-10-12 Caoyun Fan , Wenqing Chen , Jidong Tian , Yitian Li , Hao He , Yaohui Jin

Identifying the mutations that drive cancer growth is key in clinical decision making and precision oncology. As driver mutations confer selective advantage and thus have an increased likelihood of occurrence, frequency-based statistical…

基因组学 · 定量生物学 2021-05-04 Adnan Akbar , Andrey Solovyev , John W Cassidy , Nirmesh Patel , Harry W Clifford

While current research has shown the importance of Multi-parametric MRI (mpMRI) in diagnosing prostate cancer (PCa), further investigation is needed for how to incorporate the specific structures of the mpMRI data, such as the regional…

机器学习 · 统计学 2021-11-04 Jin Jin , Lin Zhang , Ethan Leng , Gregory J. Metzger , Joseph S. Koopmeiners

Training a neural network with a large labeled dataset is still a dominant paradigm in computational histopathology. However, obtaining such exhaustive manual annotations is often expensive, laborious, and prone to inter and Intra-observer…

计算机视觉与模式识别 · 计算机科学 2021-11-03 Chetan L. Srinidhi , Seung Wook Kim , Fu-Der Chen , Anne L. Martel

Segmentation of Prostate Cancer (PCa) tissues from Gleason graded histopathology images is vital for accurate diagnosis. Although deep learning (DL) based segmentation methods achieve state-of-the-art accuracy, they rely on large datasets…

图像与视频处理 · 电气工程与系统科学 2021-10-04 Dwarikanath Mahapatra

Deep learning-based analysis of high-frequency, high-resolution micro-ultrasound data shows great promise for prostate cancer detection. Previous approaches to analysis of ultrasound data largely follow a supervised learning paradigm.…

图像与视频处理 · 电气工程与系统科学 2022-11-02 Paul F. R. Wilson , Mahdi Gilany , Amoon Jamzad , Fahimeh Fooladgar , Minh Nguyen Nhat To , Brian Wodlinger , Purang Abolmaesumi , Parvin Mousavi

The Multiple Instance Hybrid Estimator for discriminative target characterization from imprecisely labeled hyperspectral data is presented. In many hyperspectral target detection problems, acquiring accurately labeled training data is…

计算机视觉与模式识别 · 计算机科学 2019-03-20 Changzhe Jiao , Chao Chen , Ronald G. McGarvey , Stephanie Bohlman , Licheng Jiao , Alina Zare

Deep Learning sets the state-of-the-art in many challenging tasks showing outstanding performance in a broad range of applications. Despite its success, it still lacks robustness hindering its adoption in medical applications. Modeling…

计算机视觉与模式识别 · 计算机科学 2019-09-19 Agnieszka Tomczack , Nassir Navab , Shadi Albarqouni

Cancer is a leading cause of death in many countries. An early diagnosis of cancer based on biomedical imaging ensures effective treatment and a better prognosis. However, biomedical imaging presents challenges to both clinical institutions…

计算机视觉与模式识别 · 计算机科学 2023-01-24 Hosein Barzekar , Yash Patel , Ling Tong , Zeyun Yu

Machine-learning-assisted cancer subtyping is a promising avenue in digital pathology. Cancer subtyping models, however, require careful training using expert annotations so that they can be inferred with a degree of known certainty (or…

Resampling algorithms are a useful approach to deal with imbalanced learning in multilabel scenarios. These methods have to deal with singularities in the multilabel data, such as the occurrence of frequent and infrequent labels in the same…

机器学习 · 计算机科学 2025-01-22 Antonio J. Rivera , Miguel A. Dávila , David Elizondo , María J. del Jesus , Francisco Charte

The accuracy of deep neural networks is significantly influenced by the effectiveness of mini-batch construction during training. In single-label scenarios, such as binary and multi-class classification tasks, it has been demonstrated that…

机器学习 · 计算机科学 2024-12-24 Ao Zhou , Bin Liu , Jin Wang , Grigorios Tsoumakas

Multi-label classification of chest X-ray images is frequently performed using discriminative approaches, i.e. learning to map an image directly to its binary labels. Such approaches make it challenging to incorporate auxiliary information…

人工智能 · 计算机科学 2021-03-11 Anjany Sekuboyina , Daniel Oñoro-Rubio , Jens Kleesiek , Brandon Malone

In hierarchical multi-label classification, a persistent challenge is enabling model predictions to reach deeper levels of the hierarchy for more detailed or fine-grained classifications. This difficulty partly arises from the natural…

机器学习 · 计算机科学 2026-02-10 Isaac Xu , Martin Gillis , Ayushi Sharma , Benjamin Misiuk , Craig J. Brown , Thomas Trappenberg

In digital pathology, both detection and classification of cells are important for automatic diagnostic and prognostic tasks. Classifying cells into subtypes, such as tumor cells, lymphocytes or stromal cells is particularly challenging.…

计算机视觉与模式识别 · 计算机科学 2022-06-07 Shahira Abousamra , David Belinsky , John Van Arnam , Felicia Allard , Eric Yee , Rajarsi Gupta , Tahsin Kurc , Dimitris Samaras , Joel Saltz , Chao Chen

Renal cell carcinoma represents a significant global health challenge with a low survival rate. This research aimed to devise a comprehensive deep-learning model capable of predicting survival probabilities in patients with renal cell…

计算机视觉与模式识别 · 计算机科学 2023-07-10 Maryamalsadat Mahootiha , Hemin Ali Qadir , Jacob Bergsland , Ilangko Balasingham

Our work introduces an innovative approach to graph learning by leveraging Hyperdimensional Computing. Graphs serve as a widely embraced method for conveying information, and their utilization in learning has gained significant attention.…

机器学习 · 计算机科学 2024-03-20 Pere Verges , Igor Nunes , Mike Heddes , Tony Givargis , Alexandru Nicolau