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Self-assembly kinetics is usually described by approaches which assume that the shape of the aggregates has a definite form (e.g., spherical, cylindrical, cubic, etc), however that is unlikely to be the case in many finite-sized…

软凝聚态物质 · 物理学 2022-07-13 L. F. Trugilho , L. G. Rizzi

Phase transitions of first and second order can easily be distinguished in small systems in the microcanonical ensemble. Configurations of phase coexistence, which are suppressed in the canonical formulation, carry important information…

凝聚态物理 · 物理学 2007-05-23 D. H. E. Gross , A. Ecker , X. Z. Zhang

Microcanonical statistics can be well applied to non-extensive systems like nuclei, atomic clusters and systems at phase transitions of first order with inhomogeneous configurations like phase separation. No thermodynamic limit has to be…

凝聚态物理 · 物理学 2007-05-23 D. H. E. Gross

Approach of mesoscopic state variables to time independent equilibrium sates (zero law of thermodynamics) gives birth to the classical equilibrium thermodynamics. Approach of fluxes and forces to fixed points (equilibrium fluxes and forces)…

统计力学 · 物理学 2023-10-25 Miroslav Grmela

Virtually every biological rate depends on temperature, yet the resulting rate-temperature relationships often deviate strongly from simple Arrhenius behavior. In this first part of a two-part review, we survey phenomenological models used…

定量方法 · 定量生物学 2026-03-11 Simen Jacobs , Julian Voits , Nikita Frolov , Ulrich S. Schwarz , Lendert Gelens

Here we first develop the thermodynamics of microcanonical phase transitions of first and second order in systems which are thermodynamically stable in the sense of van Hove. We show how both kinds of phase transitions can unambiguously be…

凝聚态物理 · 物理学 2019-08-17 D. H. E. Gross , M. E. Madjet , O. Schapiro

A microscopic model for thermal excitation of vibrational ground state of a molecule interacting with a condensed medium is developed. The master equation for evolution of occupancies of the vibrational levels is derived. The rate constant…

统计力学 · 物理学 2011-03-04 V. I. Teslenko , D. Y. Iatsenko

A master equation describing the evolution of averaged molecular state occupancies in molecular systems where alternation of molecular energy levels is caused by discrete dichotomous and trichotomous stochastic fields, is derived. This…

化学物理 · 物理学 2012-12-06 E. G. Petrov , V. I. Teslenko

Microcanonical thermodynamics (MT) is analysed for phase transitions of first and second order in finite systems. The transiton temperature, the latent heat and the surface tension of first order transitions can easily be determined by MT…

核理论 · 物理学 2007-05-23 D. H. E. Gross

A quantum theory on conformation-electron system is presented. Protein folding is regarded as the quantum transition between torsion states on polypeptide chain, and the folding rate is calculated by nonadiabatic operator method. The theory…

生物大分子 · 定量生物学 2011-02-21 Liaofu Luo , Jun Lu

Random first order transition theory is used to determine the role of attractive and repulsive interactions in the dynamics of supercooled liquids. Self-consistent phonon theory, an approximate mean field treatment consistent with random…

软凝聚态物质 · 物理学 2007-09-13 Randall W. Hall , Peter G. Wolynes

Thermodynamics and kinetics are thought to be linked in glass transitions. The quantitative predictions of -relaxation activation barriers provided by the theory of glasses based on random first order transitions are compared with…

软凝聚态物质 · 物理学 2007-05-23 Jacob D. Stevenson , Peter G. Wolynes

In the general case of a many-body Hamiltonian system, described by an autonomous Hamiltonian $H$, and with $K\geq 0$ independent conserved quantities, we derive the microcanonical thermodynamics. By a simple approach, based on the…

统计力学 · 物理学 2015-06-04 Roberto Franzosi

From the point of view of statistical mechanics, a full characterisation of a molecular system requires the experimental determination of its possible states, their populations and the respective interconversion rates. Well-established…

计算物理 · 物理学 2020-06-02 Z. Faidon Brotzakis , Michele Vendruscolo , Peter. G. Bolhuis

Equilibrium statistics of finite Hamiltonian systems is fundamentally described by the microcanonical ensemble (ME). Canonical, or grand-canonical partition functions are deduced from this by Laplace transform. Only in the thermodynamic…

核理论 · 物理学 2008-11-26 D. H. E. Gross

The incredible thermo-mechanical properties of biological materials arise from the microscopic scale due to a complex hierarchical mechanism, regulated by microinstabilities at the molecular level. The description of such complex structures…

生物物理 · 物理学 2022-10-26 Luca Bellino

Classical theories of chemical kinetics assume independent reactions in dilute solutions, whose rates are determined by mean concentrations. In condensed matter, strong interactions alter chemical activities and create inhomogeneities that…

材料科学 · 物理学 2013-04-17 Martin Z. Bazant

Aggregation transitions in disordered mesoscopic systems play an important role in several areas of knowledge, from materials science to biology. The lack of a thermodynamic limit in systems that are intrinsically finite makes the…

统计力学 · 物理学 2022-02-25 L. F. Trugilho , L. G. Rizzi

In this work, we establish a general theory of phase transitions and quantum entanglement in the equilibrium state at arbitrary temperatures. First, we derived a set of universal functional relations between the matrix elements of two-body…

量子物理 · 物理学 2018-05-07 Bo-Bo Wei

In these lecture notes, the basic principles of stochastic thermodynamics are developed starting with a closed system in contact with a heat bath. A trajectory undergoes Markovian transitions between observable meso-states that correspond…

统计力学 · 物理学 2018-06-13 Udo Seifert
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