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To make informative public policy decisions in battling the ongoing COVID-19 pandemic, it is important to know the disease prevalence in a population. There are two intertwined difficulties in estimating this prevalence based on testing…

统计方法学 · 统计学 2020-12-01 Bryan Cai , John P. A. Ioannidis , Eran Bendavid , Lu Tian

Group testing was conceived during World War II to identify soldiers infected with syphilis using as few tests as possible, and it has attracted renewed interest during the COVID-19 pandemic. A long-standing assumption in the probabilistic…

社会与信息网络 · 计算机科学 2022-11-18 Surin Ahn , Wei-Ning Chen , Ayfer Ozgur

To strengthen inferences meta analyses are commonly used to summarize information from a set of independent studies. In some cases, though, the data may not satisfy the assumptions underlying the meta analysis. Using three Bayesian methods…

应用统计 · 统计学 2022-04-07 Dexter Cahoy , Joseph Sedransk

In group testing, the task is to identify defective items by testing groups of them together using as few tests as possible. We consider the setting where each item is defective with a constant probability $\alpha$, independent of all other…

离散数学 · 计算机科学 2024-11-15 Lukas Hintze , Lena Krieg , Olga Scheftelowitsch , Haodong Zhu

When the infection prevalence of a disease is low, Dorfman showed 80 years ago that testing groups of people can prove more efficient than testing people individually. Our goal in this paper is to propose new group testing algorithms that…

统计方法学 · 统计学 2020-07-23 Marco Cuturi , Olivier Teboul , Quentin Berthet , Arnaud Doucet , Jean-Philippe Vert

Testing is an important part of tackling the COVID-19 pandemic. Availability of testing is a bottleneck due to constrained resources and effective prioritization of individuals is necessary. Here, we discuss the impact of different…

机器学习 · 计算机科学 2020-07-30 Hagit Grushka-Cohen , Raphael Cohen , Bracha Shapira , Jacob Moran-Gilad , Lior Rokach

A hypothesis testing and an interval estimation are studied for the common mean of several lognormal populations. Two methods are given based on the concept of generalized p-value and generalized confidence interval. These new methods are…

统计理论 · 数学 2014-05-06 Javad Behboodian , Ali Akbar Jafari

The time varying effective reproduction number is an important parameter for communication and policy decisions during an epidemic. In this paper, we present new statistical methods for estimating the reproduction number based on the…

统计方法学 · 统计学 2025-10-02 Hans R. Künsch , Fabio Sigrist

COVID-19 has resulted in a global health crisis that may become even more acute over the upcoming months. One of the main reasons behind the current rapid growth of COVID-19 in the U.S. population is the limited availability of testing kits…

信息论 · 计算机科学 2020-04-13 Krishna R. Narayanan , Anoosheh Heidarzadeh , Ramanan Laxminarayan

Estimating prevalence, the fraction of a population with a certain medical condition, is fundamental to epidemiology. Traditional methods rely on classification of test samples taken at random from a population. Such approaches to…

统计方法学 · 统计学 2022-03-25 Paul Patrone , Anthony Kearsley

Causal discovery can be a powerful tool for investigating causality when a system can be observed but is inaccessible to experiments in practice. Despite this, it is rarely used in any scientific or medical fields. One of the major hurdles…

机器学习 · 统计学 2019-10-07 Erich Kummerfeld , Alexander Rix

Anomaly detection methods identify examples that do not follow the expected behaviour, typically in an unsupervised fashion, by assigning real-valued anomaly scores to the examples based on various heuristics. These scores need to be…

机器学习 · 计算机科学 2023-10-19 Lorenzo Perini , Paul Buerkner , Arto Klami

First Few X (FFX) studies collect household-stratified data in the early stages of a pandemic, in order to infer severity and transmissibility of an emerging disease. We present a Bayesian method to approximately infer population-level…

种群与进化 · 定量生物学 2021-11-22 P. G. Ballard , A. J. Black , J. V. Ross

Measurement error is a common challenge for causal inference studies using electronic health record (EHR) data, where clinical outcomes and treatments are frequently mismeasured. Researchers often address measurement error by conducting…

Intuitively, unfamiliarity should lead to lack of confidence. In reality, current algorithms often make highly confident yet wrong predictions when faced with relevant but unfamiliar examples. A classifier we trained to recognize gender is…

计算机视觉与模式识别 · 计算机科学 2020-09-09 Zhizhong Li , Derek Hoiem

Polymerase chain reaction (PCR) testing is the gold standard for diagnosing COVID-19. PCR amplifies the virus DNA 40 times to produce measurements of viral loads that span seven orders of magnitude. Unfortunately, the outputs of these tests…

定量方法 · 定量生物学 2022-01-19 Hsin-Po Wang , Ryan Gabrys , Alexander Vardy

During the SARS-CoV-2 pandemic, polymerase chain reaction (PCR) and lateral flow device (LFD) tests were frequently deployed to detect the presence of SARS-CoV-2. Many of these tests were singleplex, and only tested for the presence of a…

应用统计 · 统计学 2024-09-02 Martyn Fyles , Christopher E. Overton , Tom Ward , Emma Bennett , Tom Fowler , Ian Hall

In this study, we analyze the effectiveness of measures aimed at finding and isolating infected individuals to contain epidemics like COVID-19, as the suppression induced over the effective reproduction number. We develop a mathematical…

种群与进化 · 定量生物学 2021-10-22 Andrea Maiorana , Marco Meneghelli , Mario Resnati

We consider the SIR model and study the first time the number of infected individuals begins to decrease and the first time this population is below a given threshold. We interpret these times as functions of the initial susceptible and…

经典分析与常微分方程 · 数学 2020-09-23 Ryan Hynd , Dennis Ikpe , Terrance Pendleton

In the group-testing literature, efficient algorithms have been developed to minimize the number of tests required to identify all minimal "defective" sub-groups embedded within a larger group, using deterministic group splitting with a…

离散数学 · 计算机科学 2020-10-20 Laurence A. Clarfeld , Margaret J. Eppstein