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In this paper, we propose a new method to perform data augmentation in a reliable way in the High Dimensional Low Sample Size (HDLSS) setting using a geometry-based variational autoencoder. Our approach combines a proper latent space…

Extracting large amounts of data from biological samples is not feasible due to radiation issues, and image processing in the small-data regime is one of the critical challenges when working with a limited amount of data. In this work, we…

机器学习 · 计算机科学 2020-07-21 Varun Mannam , Arman Kazemi

A shift-invariant variational autoencoder (shift-VAE) is developed as an unsupervised method for the analysis of spectral data in the presence of shifts along the parameter axis, disentangling the physically-relevant shifts from other…

无序系统与神经网络 · 物理学 2021-04-22 Yongtao Liu , Rama K. Vasudevan , Kyle Kelley , Dohyung Kim , Yogesh Sharma , Mahshid Ahmadi , Sergei V. Kalinin , Maxim Ziatdinov

We propose an algorithm, guided variational autoencoder (Guided-VAE), that is able to learn a controllable generative model by performing latent representation disentanglement learning. The learning objective is achieved by providing…

计算机视觉与模式识别 · 计算机科学 2020-04-06 Zheng Ding , Yifan Xu , Weijian Xu , Gaurav Parmar , Yang Yang , Max Welling , Zhuowen Tu

We introduce a novel variational autoencoder (VAE) architecture that can generate realistic and diverse high energy physics events. The model we propose utilizes several techniques from VAE literature in order to simulate high fidelity jet…

高能物理 - 唯象学 · 物理学 2020-09-11 Kosei Dohi

Machine learning methods often need a large amount of labeled training data. Since the training data is assumed to be the ground truth, outliers can severely degrade learned representations and performance of trained models. Here we apply…

机器学习 · 统计学 2019-12-24 Haleh Akrami , Anand A. Joshi , Jian Li , Sergul Aydore , Richard M. Leahy

We propose a variational autoencoder (VAE) approach for parameter estimation in nonlinear mixed-effects models based on ordinary differential equations (NLME-ODEs) using longitudinal data from multiple subjects. In moderate dimensions,…

统计方法学 · 统计学 2026-02-11 Zhe Li , Mélanie Prague , Rodolphe Thiébaut , Quentin Clairon

Deep generative models are increasingly becoming integral parts of the in silico molecule design pipeline and have dual goals of learning the chemical and structural features that render candidate molecules viable while also being flexible…

生物大分子 · 定量生物学 2021-06-08 Yair Schiff , Vijil Chenthamarakshan , Karthikeyan Natesan Ramamurthy , Payel Das

Sparse Autoencoders (SAEs) are a powerful dictionary learning technique for decomposing neural network activations, translating the hidden state into human ideas with high semantic value despite no external intervention or guidance.…

机器学习 · 计算机科学 2025-12-17 Albert Miao , Chenliang Zhou , Jiawei Zhou , Cengiz Oztireli

The development of deep learning methods for magnetic resonance spectroscopy (MRS) is often hindered by limited availability of large, high-quality training datasets. While physics-based simulations are commonly used to mitigate this…

Climate anomalies significantly impact terrestrial carbon cycle dynamics, necessitating robust methods for detecting and analyzing anomalous behavior in plant productivity. This study presents a novel application of variational autoencoders…

机器学习 · 计算机科学 2025-10-07 Bharat Sharma , Jitendra Kumar

Deep generative models have been enjoying success in modeling continuous data. However it remains challenging to capture the representations for discrete structures with formal grammars and semantics, e.g., computer programs and molecular…

机器学习 · 计算机科学 2018-02-27 Hanjun Dai , Yingtao Tian , Bo Dai , Steven Skiena , Le Song

Deep probabilistic generative models have achieved incredible success in many fields of application. Among such models, variational autoencoders (VAEs) have proved their ability in modeling a generative process by learning a latent…

机器学习 · 计算机科学 2022-12-16 Eleonora Grassucci , Danilo Comminiello , Aurelio Uncini

Variational autoencoder (VAE) neural networks can be trained to generate power system states that capture both marginal distribution and multivariate dependencies of historical data. The coordinates of the latent space codes of VAEs have…

系统与控制 · 电气工程与系统科学 2023-03-22 Chenguang Wang , Ensieh Sharifnia , Simon H. Tindemans , Peter Palensky

We present a conditional variational autoencoder (CVAE) that generates stellar spectra covering 4000 $\le$ $T_{\mathrm{eff}$ $\le$ 11,000 K, $2.0 \le \log g \le 5.0$ dex, $-1.5 \le [\mathrm{M}/\mathrm{H}] \le +1.5$ dex, $v\sin i \le 300$…

太阳与恒星天体物理 · 物理学 2025-08-26 Marwan Gebran , Ian Bentley

Discrete latent variables are considered important for real world data, which has motivated research on Variational Autoencoders (VAEs) with discrete latents. However, standard VAE training is not possible in this case, which has motivated…

机器学习 · 统计学 2023-03-27 Enrico Guiraud , Jakob Drefs , Jörg Lücke

In this tutorial, we explore Variational Autoencoders (VAEs), an essential framework for unsupervised learning, particularly suited for high-dimensional datasets such as neuroimaging. By integrating deep learning with Bayesian inference,…

图像与视频处理 · 电气工程与系统科学 2025-01-15 C. Vázquez-García , F. J. Martínez-Murcia , F. Segovia Román , Juan M. Górriz Sáez

An effective approach to non-parallel voice conversion (VC) is to utilize deep neural networks (DNNs), specifically variational auto encoders (VAEs), to model the latent structure of speech in an unsupervised manner. A previous study has…

音频与语音处理 · 电气工程与系统科学 2020-04-09 Wen-Chin Huang , Hsin-Te Hwang , Yu-Huai Peng , Yu Tsao , Hsin-Min Wang

Continuous speech representations based on Variational Autoencoders (VAEs) have emerged as a promising alternative to traditional spectrogram or discrete token based features for speech generation and reconstruction. Recent research has…

声音 · 计算机科学 2026-05-26 Changhao Cheng , Wei Wang , Wangyou Zhang , Dongya Jia , Jian Wu , Zhuo Chen , Yanmin Qian

Particle accelerators are time-varying systems whose components are perturbed by external disturbances. Tuning accelerators can be a time-consuming process involving manual adjustment of multiple components, such as RF cavities, to minimize…

加速器物理 · 物理学 2024-08-09 Mahindra Rautela , Alan Williams , Alexander Scheinker