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We consider the problem of segmenting a biomedical image into anatomical regions of interest. We specifically address the frequent scenario where we have no paired training data that contains images and their manual segmentations. Instead,…

计算机视觉与模式识别 · 计算机科学 2019-03-14 Adrian V. Dalca , John Guttag , Mert R. Sabuncu

Automatic lesion detection and segmentation from [${}^{18}$F]FDG PET/CT scans is a challenging task, due to the diversity of shapes, sizes, FDG uptake and location they may present, besides the fact that physiological uptake is also present…

图像与视频处理 · 电气工程与系统科学 2023-09-26 Yamila Rotstein Habarnau , Mauro Namías

In this paper, we propose a new image instance segmentation method that segments individual glands (instances) in colon histology images. This is a task called instance segmentation that has recently become increasingly important. The…

计算机视觉与模式识别 · 计算机科学 2016-07-20 Yan Xu , Yang Li , Mingyuan Liu , Yipei Wang , Yubo Fan , Maode Lai , Eric I-Chao Chang

Segmentation of 3D medical images is a critical task for accurate diagnosis and treatment planning. Convolutional neural networks (CNNs) have dominated the field, achieving significant success in 3D medical image segmentation. However, CNNs…

图像与视频处理 · 电气工程与系统科学 2025-02-11 Canxuan Gang

An important part of Digital Pathology is the analysis of multiple digitised whole slide images from differently stained tissue sections. It is common practice to mount consecutive sections containing corresponding microscopic structures on…

计算机视觉与模式识别 · 计算机科学 2018-11-06 Thomas Lampert , Odyssée Merveille , Jessica Schmitz , Germain Forestier , Friedrich Feuerhake , Cédric Wemmert

Accurate delineation of kidney tumours in Computed Tomography (CT) is essential for downstream quantitative analysis and precision oncology, but manual segmentation is a specialised task, time-consuming and difficult to scale. Automated 3D…

计算机视觉与模式识别 · 计算机科学 2026-05-08 Saúl Alonso-Monsalve , Leigh H. Whitehead , Adam Aurisano , Lorena Escudero Sanchez

Biomedical imaging is a driver of scientific discovery and core component of medical care, currently stimulated by the field of deep learning. While semantic segmentation algorithms enable 3D image analysis and quantification in many…

计算机视觉与模式识别 · 计算机科学 2020-12-09 Fabian Isensee , Paul F. Jäger , Simon A. A. Kohl , Jens Petersen , Klaus H. Maier-Hein

This work is about the semantic segmentation of skin lesion boundary and their attributes using Image-to-Image Translation with Conditional Adversarial Nets. Melanoma is a type of skin cancer that can be cured if detected in time.…

图像与视频处理 · 电气工程与系统科学 2021-02-02 Cristian Lazo

One of the major difficulties in medical image segmentation is the high variability of these images, which is caused by their origin (multi-centre), the acquisition protocols (multi-parametric), as well as the variability of human anatomy,…

图像与视频处理 · 电气工程与系统科学 2022-11-09 Jhon Jairo Saenz-Gamboa , Julio Domenech , Antonio Alonso-Manjarrés , Jon A. Gómez , Maria de la Iglesia-Vayá

Image segmentation is a fundamental task in the field of imaging and vision. Supervised deep learning for segmentation has achieved unparalleled success when sufficient training data with annotated labels are available. However, annotation…

图像与视频处理 · 电气工程与系统科学 2023-04-10 Hongrun Zhang , Liam Burrows , Yanda Meng , Declan Sculthorpe , Abhik Mukherjee , Sarah E Coupland , Ke Chen , Yalin Zheng

Computed tomography (CT) segmentation models often contain classes that are not currently supported by magnetic resonance imaging (MRI) segmentation models. In this study, we show that a simple image inversion technique can significantly…

图像与视频处理 · 电气工程与系统科学 2025-09-25 Hartmut Häntze , Lina Xu , Maximilian Rattunde , Leonhard Donle , Felix J. Dorfner , Alessa Hering , Lisa C. Adams , Keno K. Bressem

In this study, a supervised retina blood vessel segmentation process was performed on the green channel of the RGB image using artificial neural network (ANN). The green channel is preferred because the retinal vessel structures can be…

图像与视频处理 · 电气工程与系统科学 2020-01-17 Esra Kaya , İsmail Sarıtaş , Ilker Ali Ozkan

Stain variability is a pervasive source of distribution shift and potential shortcut learning in renal pathology AI. We ask whether lupus nephritis glomerular lesion classifiers exploit stain as a shortcut, and how to mitigate such bias…

计算机视觉与模式识别 · 计算机科学 2026-04-13 Mohammad Daouk , Jan Ulrich Becker , Neeraja Kambham , Anthony Chang , Hien Van Nguyen , Chandra Mohan

There is large consent that successful training of deep networks requires many thousand annotated training samples. In this paper, we present a network and training strategy that relies on the strong use of data augmentation to use the…

计算机视觉与模式识别 · 计算机科学 2015-05-19 Olaf Ronneberger , Philipp Fischer , Thomas Brox

Automated slice classification is clinically relevant since it can be incorporated into medical image segmentation workflows as a preprocessing step that would flag slices with a higher probability of containing tumors, thereby directing…

图像与视频处理 · 电气工程与系统科学 2024-03-13 Shadab Ahamed , Yixi Xu , Ingrid Bloise , Joo H. O , Carlos F. Uribe , Rahul Dodhia , Juan L. Ferres , Arman Rahmim

The morphology of glands has been used routinely by pathologists to assess the malignancy degree of adenocarcinomas. Accurate segmentation of glands from histology images is a crucial step to obtain reliable morphological statistics for…

计算机视觉与模式识别 · 计算机科学 2016-04-12 Hao Chen , Xiaojuan Qi , Lequan Yu , Pheng-Ann Heng

Precise segmentation of knee tissues from magnetic resonance imaging (MRI) is critical in quantitative imaging and diagnosis. Convolutional neural networks (CNNs), which are state of the art, have limitations owing to the lack of…

图像与视频处理 · 电气工程与系统科学 2021-09-30 Sheheryar Khan , Basim Azam , Yongcheng Yao , Weitian Chen

Automatic lymph node (LN) segmentation and detection for cancer staging are critical. In clinical practice, computed tomography (CT) and positron emission tomography (PET) imaging detect abnormal LNs. Despite its low contrast and variety in…

图像与视频处理 · 电气工程与系统科学 2022-12-23 Al-Akhir Nayan , Boonserm Kijsirikul , Yuji Iwahori

Brain tissue segmentation from multimodal MRI is a key building block of many neuroscience analysis pipelines. It could also play an important role in many clinical imaging scenarios. Established tissue segmentation approaches have however…

图像与视频处理 · 电气工程与系统科学 2020-04-15 Reuben Dorent , Wenqi Li , Jinendra Ekanayake , Sebastien Ourselin , Tom Vercauteren

Multi-phase computed tomography (CT) has been widely used for the preoperative diagnosis of kidney cancer due to its non-invasive nature and ability to characterize renal lesions. However, since enhancement patterns of renal lesions across…

图像与视频处理 · 电气工程与系统科学 2024-06-25 Kwang-Hyun Uhm , Seung-Won Jung , Sung-Hoo Hong , Sung-Jea Ko