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A key parameter in models for the spread of infectious diseases is the basic reproduction number $R_0$, which is the expected number of secondary cases a typical infected primary case infects during its infectious period in a large mostly…

种群与进化 · 定量生物学 2017-09-05 Kristoffer Spricer , Pieter Trapman

The ongoing global pandemic of infection disease COVID-19 caused by the 2019 novel coronavirus (SARS-COV-2, formerly 2019-nCoV) presents critical threats to public health and the economy since it was identified in China, December 2019. The…

基因组学 · 定量生物学 2020-06-02 Changchuan Yin

COVID-19 is an emergent viral infection which rose in December 2019 in a city in the Chinese province of Hubei, Wuhan; the viral aetiology of this infection is now known as COVID-19 virus, which belongs to the Betacoronavirus genus. This…

种群与进化 · 定量生物学 2020-03-17 Alfonso Vivanco-Lira

Epidemic is a rapid and wide spread of infectious disease threatening many lives and economy damages. It is important to fore-tell the epidemic lifetime so to decide on timely and remedic actions. These measures include closing borders,…

A great issue of discussion of an infectious disease is its basic reproduction number R0, which provides an estimation of the contagiousness of the disease. When R0 > 1, the disease spread will potentially lead to an outbreak, such that of…

种群与进化 · 定量生物学 2021-01-18 Dimitrios G. Patsatzis

Coronavirus disease (COVID-19) is a severe ongoing novel pandemic that has emerged in Wuhan, China, in December 2019. As of October 13, the outbreak has spread rapidly across the world, affecting over 38 million people, and causing over 1…

应用统计 · 统计学 2021-08-31 Gaetano Perone

Since the first case of COVID-19 disease in Wuhan in December 2019, there is a worldwide struggle to reduce the transmission of acute respiratory syndrome coronavirus SARS-CoV-2. Many countries worldwide decided to impose local lockdowns in…

其他定量生物学 · 定量生物学 2022-08-09 Daniela Dobrynin , Iryna Polishchuk , Boaz Pokroy

Addressed in this work is the performance of five popular algorithms, which aim at assessing the dissemination dynamics of the COVID-19 disease on the basis of the time series of new confirmed cases. The tests are based on simulated data,…

种群与进化 · 定量生物学 2021-05-10 Evangelos Matsinos

The recent epidemic of Coronavirus (COVID-19) that started in China has already been "exported" to more than 140 countries in all the continents, evolving in most of them by local spreading. In this contribution we analyze the trends of the…

种群与进化 · 定量生物学 2020-03-23 Albertine Weber , Flavio Ianelli , Sebastian Goncalves

Coronaviruses have recently caused world-wide severe outbreaks: SARS (Severe Acute Respiratory Syndrome) in 2002 and MERS (Middle-East Respiratory Syndrome) in 2012. At the end of 2019, a new coronavirus outbreak appeared in Wuhan (China)…

基因组学 · 定量生物学 2020-04-03 Miguel Ramos Pascual

One of the key indicators used in tracking the evolution of an infectious disease isthe reproduction number. This quantity is usually computed using the reportednumber of cases, but ignoring that many more individuals may be infected…

种群与进化 · 定量生物学 2020-09-11 Andrea De Simone , Marco Piangerelli

The novel Coronavirus disease (COVID-19) is a severe respiratory infection that officially occurred in Wuhan, China, in December 2019. In late February, the disease began to spread quickly across the world, causing serious health, social,…

应用统计 · 统计学 2020-06-08 Gaetano Perone

Despite improved control measures, Ebola remains a serious public health risk in African regions where recurrent outbreaks have been observed since the initial epidemic in 1976. Using epidemic modeling and data from two well-documented…

其他定量生物学 · 定量生物学 2007-05-23 Gerardo Chowell , Nick W. Hengartner , Carlos Castillo-Chavez , Paul W. Fenimore , J. M. Hyman

The correct evaluation of the reproductive number $R$ for COVID-19 -- which characterizes the average number of secondary cases generated by each typical primary case -- is central in the quantification of the potential scope of the…

应用统计 · 统计学 2021-04-15 Claire Donnat , Susan Holmes

The coronavirus disease 2019 (COVID-19) has become a public health emergency of international concern affecting more than 200 countries and territories worldwide. As of September 30, 2020, it has caused a pandemic outbreak with more than 33…

种群与进化 · 定量生物学 2020-10-13 Tanujit Chakraborty , Indrajit Ghosh , Tirna Mahajan , Tejasvi Arora

In the present article we introduce an epidemiological model for the investigation of the spread of epidemics caused by viruses. The model is applied specifically to COVID-19, the disease caused by the SARS-Cov-2 virus (aka "novel…

种群与进化 · 定量生物学 2020-04-10 Rodrigo A. Schulz , Carlos H. Coimbra-Araújo , Samuel W. S. Costiche

The basic reproduction number ($R_0$) is an epidemiological metric that represents the average number of new infections caused by a single infectious individual in a completely susceptible population. The methodology for calculating this…

代数拓扑 · 数学 2025-12-05 Trevor Reckell , Beckett Sterner , Petar Jevtić

The recent emergence of a new coronavirus, COVID-19, has gained extensive coverage in public media and global news. As of 24 March 2020, the virus has caused viral pneumonia in tens of thousands of people in Wuhan, China, and thousands of…

计算机与社会 · 计算机科学 2020-07-29 Artur Strzelecki

The novel coronavirus disease (COVID-19) is a highly contagious respiratory disease that was first detected in Wuhan, China in December 2019, and has since spread around the globe, claiming more than 69,000 lives by the time this protocol…

种群与进化 · 定量生物学 2020-04-08 Bo Zhang , Ting Ye , Siyu Heng , Michael Z. Levy , Dylan S. Small

Since the first coronavirus case was identified in the U.S. on Jan. 21, more than 1 million people in the U.S. have confirmed cases of COVID-19. This infectious respiratory disease has spread rapidly across more than 3000 counties and 50…

机器学习 · 计算机科学 2021-06-25 Shuang Li , Lu Wang , Xinyun Chen , Yixiang Fang , Yan Song