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Network-oriented research has been increasingly popular in many scientific areas. In neuroscience research, imaging-based network connectivity measures have become the key for understanding brain organizations, potentially serving as…

机器学习 · 统计学 2023-03-14 Yikai Wang , Ying Guo

This paper extends previous identification method to the asynchronous sampling scenario, enabling the simultaneous handling of asynchronous, non-uniform, and slow-rate sampling conditions. Moving beyond lumped systems, the proposed…

系统与控制 · 电气工程与系统科学 2026-02-05 Yunxiang Ma , Tong Zhou

It is well-known that intrinsically disordered proteins (IDP) are highly dynamic, which is related to their functionality in various biological processes. However, the characterization of the intricate structures of IDP has been a…

生物物理 · 物理学 2025-03-18 Danqi Lang , Le Chen , Jingyuan Li

We introduce techniques for exploring the functionality of a neural network and extracting simple, human-readable approximations to its performance. By performing gradient ascent on the input space of the network, we are able to produce…

高能物理 - 唯象学 · 物理学 2018-04-26 Thomas Roxlo , Matthew Reece

This paper (parts I and II) provides an expository introduction to monotone and near-monotone dynamical systems associated to biochemical networks, those whose graphs are consistent or near-consistent. Many conclusions can be drawn from…

分子网络 · 定量生物学 2007-05-23 Eduardo D. Sontag

In analyzing and assessing the condition of dynamical systems, it is necessary to account for nonlinearity. Recent advances in computation have rendered previously computationally infeasible analyses readily executable on common computer…

计算工程、金融与科学 · 计算机科学 2021-09-24 Thomas Simpson , Nikolaos Dervilis , Eleni Chatzi

Elastic topological states have been receiving increased intention in numerous scientific and engineering fields due to their defect-immune nature, resulting in applications of vibration control and information processing. Here, we present…

应用物理 · 物理学 2023-05-31 Shuaifeng Li , Panayotis G. Kevrekidis , Jinkyu Yang

An inverse modeling technique is introduced that combines elements of coupled logistic map models and wavelet analysis for the purpose of analyzing partial synchronization states in high-dimensional systems. Using Embedded Complex Logistic…

适应与自组织系统 · 物理学 2007-05-23 Sandy Shaw

The properties of complex networked systems arise from the interplay between the dynamics of their elements and the underlying topology. Thus, to understand their behaviour, it is crucial to convene as much information as possible about…

神经元与认知 · 定量生物学 2024-06-18 Gustavo Menesse , Akke Mats Houben , Jordi Soriano , Joaquin J. Torres

Natural physical, chemical, and biological dynamical systems are often complex, with heterogeneous components interacting in diverse ways. We show how simple graph neural networks can be designed to jointly learn the interaction rules and…

Seeking effective neural networks is a critical and practical field in deep learning. Besides designing the depth, type of convolution, normalization, and nonlinearities, the topological connectivity of neural networks is also important.…

计算机视觉与模式识别 · 计算机科学 2020-08-20 Kun Yuan , Quanquan Li , Jing Shao , Junjie Yan

We develop methods to efficiently reconstruct the topology and line parameters of a power grid from the measurement of nodal variables. We propose two compressed sensing algorithms that minimize the amount of necessary measurement resources…

系统与控制 · 计算机科学 2019-07-10 Farnaz Basiri , Jose Casadiego , Marc Timme , Dirk Witthaut

Dynamic networks consist of a sequence of time-varying networks, and it is of great importance to detect the network change points. Most existing methods focus on detecting abrupt change points, necessitating the assumption that the…

统计方法学 · 统计学 2023-10-13 Yuzhao Zhang , Jingnan Zhang , Yifan Sun , Junhui Wang

Reconstructing weighted networks from partial information is necessary in many important circumstances, e.g. for a correct estimation of systemic risk. It has been shown that, in order to achieve an accurate reconstruction, it is crucial to…

物理与社会 · 物理学 2017-03-07 Tiziano Squartini , Giulio Cimini , Andrea Gabrielli , Diego Garlaschelli

Given the superposition of a low-rank matrix plus the product of a known fat compression matrix times a sparse matrix, the goal of this paper is to establish deterministic conditions under which exact recovery of the low-rank and sparse…

信息论 · 计算机科学 2013-10-01 Morteza Mardani , Gonzalo Mateos , Georgios B. Giannakis

This paper studies reduced-order modeling of dynamic networks with strongly connected topology. Given a graph clustering of an original complex network, we construct a quotient graph with less number of vertices, where the edge weights are…

最优化与控制 · 数学 2020-03-10 Xiaodong Cheng , Lanlin Yu , Dingchao Ren , Jacquelien M. A. Scherpen

Latent dynamics models have emerged as powerful tools for modeling and interpreting neural population activity. Recently, there has been a focus on incorporating simultaneously measured behaviour into these models to further disentangle…

神经元与认知 · 定量生物学 2021-10-29 Cole Hurwitz , Akash Srivastava , Kai Xu , Justin Jude , Matthew G. Perich , Lee E. Miller , Matthias H. Hennig

Unsupervised learning aims at the discovery of hidden structure that drives the observations in the real world. It is essential for success in modern machine learning. Latent variable models are versatile in unsupervised learning and have…

机器学习 · 计算机科学 2016-06-13 Furong Huang

This paper (parts I and II) provides an expository introduction to monotone and near-monotone dynamical systems associated to biochemical networks, those whose graphs are consistent or near-consistent. Many conclusions can be drawn from…

分子网络 · 定量生物学 2007-05-23 Eduardo D. Sontag

Dynamic mode decomposition has emerged as a leading technique to identify spatiotemporal coherent structures from high-dimensional data, benefiting from a strong connection to nonlinear dynamical systems via the Koopman operator. In this…

系统与控制 · 计算机科学 2017-12-01 Zhe Bai , Eurika Kaiser , Joshua L. Proctor , J. Nathan Kutz , Steven L. Brunton