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Nested structure, which is non-random, controls cooperation dynamics and biodiversity in plant-animal mutualistic networks. This structural pattern has been explained in a static (non-growth) network models. However, evolutionary processes…

种群与进化 · 定量生物学 2015-03-19 Kazuhiro Takemoto , Masanori Arita

Insect monitoring is critical to improve our understanding and ability to preserve and restore biodiversity, sustainably produce crops, and reduce vectors of human and livestock disease. However, conventional monitoring methods of trapping…

We have generalized our ``unified'' model of evolutionary ecology by taking into account the possible movements of the organisms from one ``patch'' to another within the same eco-system. We model the spatial extension of the eco-system…

种群与进化 · 定量生物学 2009-11-10 Dietrich Stauffer , Ambarish Kunwar , Debashish Chowdhury

The dynamics of a prey-predator system with foraging facilitation among predators are investigated. The analysis involves the computation of many semi-algebraic systems of large degrees. We apply the pseudo-division reduction, real-root…

动力系统 · 数学 2020-02-26 Yong Yao

Previous work has shown that species interacting in an ecosystem and actors transacting in an economic context may have notable similarities in behavior. However, the specific mechanism that may underlie similarities in nature and human…

物理与社会 · 物理学 2011-10-04 Serguei Saavedra , Felix Reed-Tsochas , Brian Uzzi

Ecological networks allow us to study the structure and function of ecosystems and gain insights on species resilience/stability. The study of this ecological networks is usually a snapshop focused in a limited specific range of space and…

种群与进化 · 定量生物学 2014-07-17 Andrzej Jarynowski , Fco. Alejandro Lopez-Nunez , Han Fan

The past two decades have seen a growing interest in combining causal information, commonly represented using causal graphs, with machine learning models. Probability trees provide a simple yet powerful alternative representation of causal…

机器学习 · 计算机科学 2022-05-18 Tue Herlau

Mutualistic interactions, which are beneficial for both interacting species, are recurrently present in ecosystems. Observations of natural systems showed that, if we draw mutualistic relationships as binary links between species, the…

物理与社会 · 物理学 2019-08-21 Clàudia Payrató Borrás , Laura Hernández , Yamir Moreno

In models for the evolution of predation from initially purely competitive species interactions, the propensity of predation is most often assumed to be a direct consequence of the relative morphological and physiological traits of…

种群与进化 · 定量生物学 2023-07-11 Yaroslav Ispolatov , Carlos Doebeli , Michael Doebeli

Here we introduce a new design framework for synthetic biology that exploits the advantages of Bayesian model selection. We will argue that the difference between inference and design is that in the former we try to reconstruct the system…

分子网络 · 定量生物学 2015-05-27 Chris Barnes , Daniel Silk , Xia Sheng , Michael P. H. Stumpf

Relationships between plants and insects vitally underpin the health of global ecosystems and food production. Through co-evolution, insects have acquired a variety of senses in response to the emergence of floral cues such as scent, colour…

生物物理 · 物理学 2025-04-07 Samuel J. Harris , Ryan A. Palmer , N. R. McDonald

Climate change is a major driver of biodiversity loss, changing the geographic range and abundance of many species. However, there remain significant knowledge gaps about the distribution of species, due principally to the amount of effort…

计算机视觉与模式识别 · 计算机科学 2023-05-03 Mélisande Teng , Amna Elmustafa , Benjamin Akera , Hugo Larochelle , David Rolnick

A fundamental problem in technological studies is how to measure the evolution of technology. The literature has suggested several approaches to measuring the level of technology (or state-of-the-art) and changes in technology. However, the…

经济学 · 定量金融 2018-03-26 Mario Coccia

We perform individual-based Monte Carlo simulations in a community consisting of two predator species competing for a single prey species, with the purpose of studying biodiversity stabilization in this simple model system. Predators are…

种群与进化 · 定量生物学 2018-07-11 Sheng Chen , Ulrich Dobramysl , Uwe C. Täuber

Cross-protection, which refers to a process whereby artificially inoculating a plant with a mild strain provides protection against a more aggressive isolate of the virus, is known to be an effective tool of disease control in plants. In…

种群与进化 · 定量生物学 2016-12-07 G. Neofytou , Y. N. Kyrychko , K. B. Blyuss

This paper investigates the competition of two species in a heterogeneous environment subject to the effect of harvesting. The most realistic harvesting case is connected with the intrinsic growth rate, and the harvesting functions are…

We develop a new statistical procedure to monitor, with opportunist data, relative species abundances and their respective preferences for dierent habitat types. Following Giraud et al. (2015), we combine the opportunistic data with some…

应用统计 · 统计学 2017-06-27 Camille Coron , Clément Calenge , Christophe Giraud , Romain Julliard

Monitoring the number of insect pests is a crucial component in pheromone-based pest management systems. In this paper, we propose an automatic detection pipeline based on deep learning for identifying and counting pests in images taken…

计算机视觉与模式识别 · 计算机科学 2016-02-25 Weiguang Ding , Graham Taylor

Bayesian inference is now a leading technique for reconstructing phylogenetic trees from aligned sequence data. In this short note, we formally show that the maximum posterior tree topology provides a statistically consistent estimate of a…

种群与进化 · 定量生物学 2013-07-12 Mike Steel

Mosquito-borne diseases cause several hundred thousand deaths every year. Deciphering mosquito host-seeking behavior is essential to prevent disease transmission through mosquito capture and surveillance. Despite recent substantial…