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Cortical surface fMRI (cs-fMRI) has recently grown in popularity versus traditional volumetric fMRI, as it allows for more meaningful spatial smoothing and is more compatible with the common assumptions of isotropy and stationarity in…

应用统计 · 统计学 2017-06-06 Amanda Mejia , Yu Ryan Yue , David Bolin , Finn Lindren , Martin A. Lindquist

A Multiregression Dynamic Model (MDM) is a class of multivariate time series that represents various dynamic causal processes in a graphical way. One of the advantages of this class is that, in contrast to many other Dynamic Bayesian…

统计方法学 · 统计学 2015-05-27 Lilia Costa , Jim Smith , Thomas Nichols , James Cussens , Eugene P. Duff , Tamar R. Makin

Typical fMRI studies have focused on either the mean trend in the blood-oxygen-level-dependent (BOLD) time course or functional connectivity (FC). However, other statistics of the neuroimaging data may contain important information. Despite…

神经元与认知 · 定量生物学 2018-08-08 Garren Gaut , Xiangrui Li , Zhong-Lin Lu , Mark Steyvers

In group activity recognition, the temporal dynamics of the whole activity can be inferred based on the dynamics of the individual people representing the activity. We build a deep model to capture these dynamics based on LSTM (long-short…

计算机视觉与模式识别 · 计算机科学 2016-04-07 Moustafa Ibrahim , Srikanth Muralidharan , Zhiwei Deng , Arash Vahdat , Greg Mori

Due to the spontaneous nature of resting-state fMRI (rs-fMRI) signals, cross-subject comparison and therefore, group studies of rs-fMRI are challenging. Most existing group comparison methods use features extracted from the fMRI time…

信号处理 · 电气工程与系统科学 2020-12-15 Anand A. Joshi , Soyoung Choi , Haleh Akrami , Richard M. Leahy

In this paper, the task-related fMRI problem is treated in its matrix factorization formulation, focused on the Dictionary Learning (DL) approach. The new method allows the incorporation of a priori knowledge associated both with the…

机器学习 · 统计学 2019-08-20 Manuel Morante , Yannis Kopsinis , Sergios Theodoridis , Athanassios Protopapas

Foundation models (FMs) have transformed computational pathology by providing powerful, general-purpose feature extractors. However, adapting and benchmarking individual FMs for specific diagnostic tasks is often time-consuming and…

计算机视觉与模式识别 · 计算机科学 2025-10-07 Peiran Quan , Zifan Gu , Zhuo Zhao , Qin Zhou , Donghan M. Yang , Ruichen Rong , Yang Xie , Guanghua Xiao

The most widely used task fMRI analyses use parametric methods that depend on a variety of assumptions. While individual aspects of these fMRI models have been evaluated, they have not been evaluated in a comprehensive manner with empirical…

应用统计 · 统计学 2016-07-14 Anders Eklund , Thomas Nichols , Hans Knutsson

Background: Inference from fMRI data faces the challenge that the hemodynamic system that relates neural activity to the observed BOLD fMRI signal is unknown. New Method: We propose a new Bayesian model for task fMRI data with the following…

应用统计 · 统计学 2020-06-01 Josef Wilzén , Anders Eklund , Mattias Villani

This work develops a novel set of algorithms, alternating Gradient Descent (GD) and minimization for MRI (altGDmin-MRI1 and altGDmin-MRI2), for accelerated dynamic MRI by assuming an approximate low-rank (LR) model on the matrix formed by…

图像与视频处理 · 电气工程与系统科学 2024-11-13 Silpa Babu , Sajan Goud Lingala , Namrata Vaswani

Decision making can be a complex process requiring the integration of several attributes of choice options. Understanding the neural processes underlying (uncertain) investment decisions is an important topic in neuroeconomics. We analyzed…

应用统计 · 统计学 2025-01-08 Piotr Majer , Peter N. C. Mohr , Hauke R. Heekeren , Wolfgang K. Härdle

Spatial whole-brain Bayesian modeling of task-related functional magnetic resonance imaging (fMRI) is a great computational challenge. Most of the currently proposed methods therefore do inference in subregions of the brain separately or do…

统计计算 · 统计学 2017-01-03 Per Sidén , Anders Eklund , David Bolin , Mattias Villani

Multivariate analysis of fMRI data has benefited substantially from advances in machine learning. Most recently, a range of probabilistic latent variable models applied to fMRI data have been successful in a variety of tasks, including…

The shared response model provides a simple but effective framework to analyse fMRI data of subjects exposed to naturalistic stimuli. However when the number of subjects or runs is large, fitting the model requires a large amount of memory…

计算机视觉与模式识别 · 计算机科学 2019-12-04 Hugo Richard , Lucas Martin , Ana Luısa Pinho , Jonathan Pillow , Bertrand Thirion

In multi-state models based on high-dimensional data, effective modeling strategies are required to determine an optimal, ideally parsimonious model. In particular, linking covariate effects across transitions is needed to conduct joint…

统计方法学 · 统计学 2024-11-27 Kaya Miah , Jelle J. Goeman , Hein Putter , Annette Kopp-Schneider , Axel Benner

Group activity detection (GAD) aims to simultaneously identify group members and categorize their collective activities within video sequences. Existing deep learning-based methods develop specialized architectures (e.g., transformer…

计算机视觉与模式识别 · 计算机科学 2025-12-08 Jihua Peng , Qianxiong Xu , Yichen Liu , Chenxi Liu , Cheng Long , Rui Zhao , Ziyue Li

Functional data analysis (FDA) is an important modern paradigm for handling infinite-dimensional data. An important task in FDA is model-based clustering, which organizes functional populations into groups via subpopulation structures. The…

统计计算 · 统计学 2017-02-14 Hien D Nguyen , Geoffrey J McLachlan , Jeremy F P Ullmann , Andrew L Janke

We propose a matrix factorization technique that decomposes the resting state fMRI (rs-fMRI) correlation matrices for a patient population into a sparse set of representative subnetworks, as modeled by rank one outer products. The…

信号处理 · 电气工程与系统科学 2018-07-26 Niharika Shimona D'Souza , Mary Beth Nebel , Nicholas Wymbs , Stewart Mostofsky , Archana Venkataraman

Many scientific fields collect longitudinal count compositional data. Each observation is a multivariate count vector, where the total counts are arbitrary, and the information lies in the relative frequency of the counts. Multiple authors…

应用统计 · 统计学 2025-06-10 Manan Saxena , Tinghua Chen , Justin D. Silverman

Functional magnetic resonance imaging (fMRI) enables indirect detection of brain activity changes via the blood-oxygen-level-dependent (BOLD) signal. Conventional analysis methods mainly rely on the real-valued magnitude of these signals.…

统计方法学 · 统计学 2023-10-31 Zhengxin Wang , Daniel B. Rowe , Xinyi Li , D. Andrew Brown