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Pretrained contextualized language models such as BERT have achieved impressive results on various natural language processing benchmarks. Benefiting from multiple pretraining tasks and large scale training corpora, pretrained models can…

信息检索 · 计算机科学 2020-05-28 Zhiyu Chen , Mohamed Trabelsi , Jeff Heflin , Yinan Xu , Brian D. Davison

Text classification tasks which aim at harvesting and/or organizing information from electronic health records are pivotal to support clinical and translational research. However these present specific challenges compared to other…

计算与语言 · 计算机科学 2020-05-15 Aurelie Mascio , Zeljko Kraljevic , Daniel Bean , Richard Dobson , Robert Stewart , Rebecca Bendayan , Angus Roberts

Autism spectrum disorder (ASD) is a complex neurodevelopmental condition whose rising prevalence places increasing demands on a lengthy diagnostic process. Machine learning (ML) has shown promise in automating ASD diagnosis, but most…

人工智能 · 计算机科学 2025-12-09 Gondy Leroy , Prakash Bisht , Sai Madhuri Kandula , Nell Maltman , Sydney Rice

The extraction of critical patient information from Electronic Health Records (EHRs) poses significant challenges due to the complexity and unstructured nature of the data. Traditional machine learning approaches often fail to capture…

计算与语言 · 计算机科学 2025-09-03 Zhimeng Luo , Abhibha Gupta , Adam Frisch , Daqing He

Recently, pre-trained contextual models, such as BERT, have shown to perform well in language related tasks. We revisit the design decisions that govern the applicability of these models for the passage re-ranking task in open-domain…

信息检索 · 计算机科学 2021-08-31 Jurek Leonhardt , Fabian Beringer , Avishek Anand

Fine-tuned Bidirectional Encoder Representations from Transformers (BERT)-based sequence classification models have proven to be effective for detecting Alzheimer's Disease (AD) from transcripts of human speech. However, previous research…

计算与语言 · 计算机科学 2020-11-13 Aparna Balagopalan , Jekaterina Novikova

Deep-learning-based clinical decision support using structured electronic health records (EHR) has been an active research area for predicting risks of mortality and diseases. Meanwhile, large amounts of narrative clinical notes provide…

计算与语言 · 计算机科学 2023-05-10 Weimin Lyu , Xinyu Dong , Rachel Wong , Songzhu Zheng , Kayley Abell-Hart , Fusheng Wang , Chao Chen

We report our ongoing work about a new deep architecture working in tandem with a statistical test procedure for jointly training texts and their label descriptions for multi-label and multi-class classification tasks. A statistical…

计算与语言 · 计算机科学 2019-06-18 Ahmad Aghaebrahimian , Mark Cieliebak

Protecting privileged communications and data from inadvertent disclosure is a paramount task in the US legal practice. Traditionally counsels rely on keyword searching and manual review to identify privileged documents in cases. As data…

信息检索 · 计算机科学 2021-12-17 Haozhen Zhao , Shi Ye , Jingchao Yang

Recent research advances achieve human-level accuracy for de-identifying free-text clinical notes on research datasets, but gaps remain in reproducing this in large real-world settings. This paper summarizes lessons learned from building a…

计算与语言 · 计算机科学 2023-12-15 Veysel Kocaman , Hasham Ul Haq , David Talby

This study evaluated the effect of BioBERT in medical text processing for the task of medical named entity recognition. Through comparative experiments with models such as BERT, ClinicalBERT, SciBERT, and BlueBERT, the results showed that…

计算与语言 · 计算机科学 2024-12-12 Jiacheng Hu , Runyuan Bao , Yang Lin , Hanchao Zhang , Yanlin Xiang

The large amount of time clinicians spend sifting through patient notes and documenting in electronic health records (EHRs) is a leading cause of clinician burnout. By proactively and dynamically retrieving relevant notes during the…

Medical text learning has recently emerged as a promising area to improve healthcare due to the wide adoption of electronic health record (EHR) systems. The complexity of the medical text such as diverse length, mixed text types, and full…

计算与语言 · 计算机科学 2022-10-11 Yong He , Cheng Wang , Shun Zhang , Nan Li , Zhaorong Li , Zhenyu Zeng

This paper explores the application of deep learning techniques, particularly focusing on BERT models, in sentiment analysis. It begins by introducing the fundamental concept of sentiment analysis and how deep learning methods are utilized…

计算与语言 · 计算机科学 2024-03-14 Yichao Wu , Zhengyu Jin , Chenxi Shi , Penghao Liang , Tong Zhan

Deep learning models have demonstrated superior performance in various healthcare applications. However, the major limitation of these deep models is usually the lack of high-quality training data due to the private and sensitive nature of…

计算与语言 · 计算机科学 2022-11-15 Qiuhao Lu , Dejing Dou , Thien Huu Nguyen

Diagnostic or procedural coding of clinical notes aims to derive a coded summary of disease-related information about patients. Such coding is usually done manually in hospitals but could potentially be automated to improve the efficiency…

计算与语言 · 计算机科学 2021-07-20 Hang Dong , Víctor Suárez-Paniagua , William Whiteley , Honghan Wu

Unsupervised pretraining is an integral part of many natural language processing systems, and transfer learning with language models has achieved remarkable results in many downstream tasks. In the clinical application of medical code…

计算与语言 · 计算机科学 2022-06-03 Shaoxiong Ji , Matti Hölttä , Pekka Marttinen

Speech contains information that is clinically relevant to some diseases, which has the potential to be used for health assessment. Recent work shows an interest in applying deep learning algorithms, especially pretrained large speech…

声音 · 计算机科学 2024-07-02 Hok-Shing Lau , Mark Huntly , Nathon Morgan , Adesua Iyenoma , Biao Zeng , Tim Bashford

Large language models (LLMs) excel at clinical information extraction but their computational demands limit practical deployment. Knowledge distillation--the process of transferring knowledge from larger to smaller models--offers a…

计算与语言 · 计算机科学 2025-01-03 Karthik S. Vedula , Annika Gupta , Akshay Swaminathan , Ivan Lopez , Suhana Bedi , Nigam H. Shah

Electronic health records (EHRs) contain patients' heterogeneous data that are collected from medical providers involved in the patient's care, including medical notes, clinical events, laboratory test results, symptoms, and diagnoses. In…

人工智能 · 计算机科学 2024-11-12 Shuai Niu , Yunya Song , Qing Yin , Yike Guo , Xian Yang