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We propose a deep neural network for supervised learning on neuroanatomical shapes. The network directly operates on raw point clouds without the need for mesh processing or the identification of point correspondences, as spatial…

计算机视觉与模式识别 · 计算机科学 2018-06-05 Benjamin Gutierrez-Becker , Christian Wachinger

Creating tetrahedral meshes with anatomically accurate surfaces is critically important for a wide range of model-based neuroimaging modalities. However, computationally efficient brain meshing algorithms and software are greatly lacking.…

医学物理 · 物理学 2017-08-31 Anh Phong Tran , Qianqian Fang

Brain extraction in magnetic resonance imaging (MRI) data is an important segmentation step in many neuroimaging preprocessing pipelines. Image segmentation is one of the research fields in which deep learning had the biggest impact in…

图像与视频处理 · 电气工程与系统科学 2023-08-15 Lukas Fisch , Stefan Zumdick , Carlotta Barkhau , Daniel Emden , Jan Ernsting , Ramona Leenings , Kelvin Sarink , Nils R. Winter , Benjamin Risse , Udo Dannlowski , Tim Hahn

Resting state fMRI is an imaging modality which reveals brain activity localization through signal changes, in what is known as Resting State Networks (RSNs). This technique is gaining popularity in neurosurgical pre-planning to visualize…

机器学习 · 计算机科学 2022-09-22 Sejal Ghate , Alberto Santamaria-Pang , Ivan Tarapov , Haris I Sair , Craig K Jones

Purpose: Gliomas are the most common and aggressive type of brain tumors due to their infiltrative nature and rapid progression. The process of distinguishing tumor boundaries from healthy cells is still a challenging task in the clinical…

图像与视频处理 · 电气工程与系统科学 2020-04-28 Ramy A. Zeineldin , Mohamed E. Karar , Jan Coburger , Christian R. Wirtz , Oliver Burgert

Nowadays, cardiac diagnosis largely depends on left ventricular function assessment. With the help of the segmentation deep learning model, the assessment of the left ventricle becomes more accessible and accurate. However, deep learning…

计算机视觉与模式识别 · 计算机科学 2021-10-29 Hang Duong Thi Thuy , Tuan Nguyen Minh , Phi Nguyen Van , Long Tran Quoc

Probabilistic atlas priors have been commonly used to derive adaptive and robust brain MRI segmentation algorithms. Widely-used neuroimage analysis pipelines rely heavily on these techniques, which are often computationally expensive. In…

计算机视觉与模式识别 · 计算机科学 2019-07-24 Adrian V. Dalca , Evan Yu , Polina Golland , Bruce Fischl , Mert R. Sabuncu , Juan Eugenio Iglesias

Purpose: To implement a brain segmentation pipeline based on convolutional neural networks, which rapidly segments 3D volumes into 27 anatomical structures. To provide an extensive, comparative study of segmentation performance on various…

图像与视频处理 · 电气工程与系统科学 2020-08-12 Jonathan Zopes , Moritz Platscher , Silvio Paganucci , Christian Federau

This paper presents, NeuroTrainer, an intelligent memory module with in-memory accelerators that forms the building block of a scalable architecture for energy efficient training for deep neural networks. The proposed architecture is based…

硬件体系结构 · 计算机科学 2017-10-13 Duckhwan Kim , Taesik Na , Sudhakar Yalamanchili , Saibal Mukhopadhyay

Separating and labeling each instance of a nucleus (instance-aware segmentation) is the key challenge in segmenting single cell nuclei on fluorescence microscopy images. Deep Neural Networks can learn the implicit transformation of a…

计算机视觉与模式识别 · 计算机科学 2021-08-11 Florian Kromp , Lukas Fischer , Eva Bozsaky , Inge Ambros , Wolfgang Doerr , Sabine Taschner-Mandl , Peter Ambros , Allan Hanbury

Precise 3D segmentation of cerebral vasculature from T1-weighted contrast-enhanced (T1CE) MRI is crucial for safe neurosurgical planning. Manual delineation is time-consuming and prone to inter-observer variability, while current automated…

计算机视觉与模式识别 · 计算机科学 2025-11-25 Mohammad Jafari Vayeghan , Niloufar Delfan , Mehdi Tale Masouleh , Mansour Parvaresh Rizi , Behzad Moshiri

Segmenting a structural magnetic resonance imaging (MRI) scan is an important pre-processing step for analytic procedures and subsequent inferences about longitudinal tissue changes. Manual segmentation defines the current gold standard in…

计算机视觉与模式识别 · 计算机科学 2017-06-07 Alex Fedorov , Jeremy Johnson , Eswar Damaraju , Alexei Ozerin , Vince Calhoun , Sergey Plis

A large number of surface-based analyses on brain imaging data adopt some specific brain atlases to better assess structural and functional changes in one or more brain regions. In these analyses, it is necessary to obtain an anatomically…

图像与视频处理 · 电气工程与系统科学 2019-10-01 Wen Zhang , Yalin Wang

This paper introduces a novel method for brain segmentation using only FLAIR MRIs, specifically targeting cases where access to other imaging modalities is limited. By leveraging existing automatic segmentation methods, we train a network…

计算机视觉与模式识别 · 计算机科学 2025-04-07 Edern Le Bot , Rémi Giraud , Boris Mansencal , Thomas Tourdias , Josè V. Manjon , Pierrick Coupé

Segmentation of brain structures on MRI is the primary step for further quantitative analysis of brain diseases. Manual segmentation is still considered the gold standard in terms of accuracy; however, such data is extremely time-consuming…

图像与视频处理 · 电气工程与系统科学 2024-10-16 Mengyu Li , Magnus Magnusson , Thilo van Eimeren , Lotta M. Ellingsen

Artificial Neural Networks are computational network models inspired by signal processing in the brain. These models have dramatically improved the performance of many learning tasks, including speech and object recognition. However,…

The construction of large-scale, high-quality datasets is a fundamental prerequisite for developing robust and generalizable foundation models in motor imagery (MI)-based brain-computer interfaces (BCIs). However, EEG signals collected from…

计算工程、金融与科学 · 计算机科学 2025-06-16 Dingkun Liu , Zhu Chen , Dongrui Wu

Whole brain segmentation from structural magnetic resonance imaging (MRI) is a prerequisite for most morphological analyses, but is computationally intense and can therefore delay the availability of image markers after scan acquisition. We…

计算机视觉与模式识别 · 计算机科学 2018-11-27 Abhijit Guha Roy , Sailesh Conjeti , Nassir Navab , Christian Wachinger

Deep-learning techniques have been used widely to alleviate the labour-intensive and time-consuming manual annotation required for pixel-level tissue characterization. Our previous study introduced an efficient single dynamic network -…

图像与视频处理 · 电气工程与系统科学 2023-05-25 Haoju Leng , Ruining Deng , Zuhayr Asad , R. Michael Womick , Haichun Yang , Lipeng Wan , Yuankai Huo

Annotation and labeling of images are some of the biggest challenges in applying deep learning to medical data. Current processes are time and cost-intensive and, therefore, a limiting factor for the wide adoption of the technology.…

计算机视觉与模式识别 · 计算机科学 2023-04-04 Manuel Zahn , Douglas P. Perrin