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We discuss recent progress in the theoretical description of chemotaxis by coupling the diffusion equation of a chemical species to equations describing the motion of sensing microorganisms. In particular, we discuss models for…

软凝聚态物质 · 物理学 2019-02-05 B. Liebchen , H. Löwen

Conspectus: The ability to navigate in chemical gradients, called chemotaxis, is crucial for the survival of microorganisms. It allows them to find food and to escape from toxins. Many microorganisms can produce the chemicals to which they…

软凝聚态物质 · 物理学 2018-10-03 Benno Liebchen , Hartmut Löwen

In this paper, we explore experimentally the phase behavior of a dense active suspension of self- propelled colloids. In addition to a solid-like and a gas-like phase observed for high and low densities, a novel cluster phase is reported at…

软凝聚态物质 · 物理学 2015-06-04 I. Theurkauff , C. Cottin-Bizonne , J. Palacci , C. Ybert , L. Bocquet

A common feature of biological self-organization is how active agents communicate with each other or their environment via chemical signaling. Such communications, mediated by self-generated chemical gradients, have consequences for both…

Microorganisms can preferentially orient and move along gradients of a chemo-attractant (i.e., chemotax) while colonies of many microorganisms can collectively undergo complex dynamics in response to chemo-attractants that they themselves…

生物物理 · 物理学 2013-10-30 Enkeleida Lushi , Raymond E. Goldstein , Michael J. Shelley

Collective and directed motility or swarming is an emergent phenomenon displayed by many self-organized assemblies of active biological matter such as clusters of embryonic cells during tissue development, cancerous cells during tumor…

生物物理 · 物理学 2016-04-05 Katherine Copenhagen , Ajay Gopinathan

This work focuses on the formation of mating aggregates in zooplankton. In particular, sexual encounters are behaviourally supported by males actively swimming in search for females, and approaching them for mating once they are found.…

种群与进化 · 定量生物学 2022-05-19 Ron Shnapp , François-Gaël Michalec , Markus Holzner

In nature, microorganisms must often cope with hostile environmental conditions. To do so they have developed sophisticated cooperative behavior and intricate communication capabilities, such as: direct cell-cell physical interactions via…

凝聚态物理 · 物理学 2007-05-23 Eshel Ben-Jacob , Inon Cohen , Ido Golding , Yonathan Kozlovsky

We study the collective motion of confined spherical microswimmers such as active colloids which we model by so-called squirmers. To simulate hydrodynamic flow fields including thermal noise, we use the method of multi-particle collision…

软凝聚态物质 · 物理学 2014-03-20 Andreas Zöttl , Holger Stark

Over the past few decades, the research community has been interested in the study of multi-agent systems and their emerging collective dynamics. These systems are all around us in nature, like bacterial colonies, fish schools, bird flocks,…

适应与自组织系统 · 物理学 2023-12-12 Gourab Kumar Sar , Dibakar Ghosh

Micro-organisms aggregate through chemotaxis against a concentration gradient of signals secreted by themselves. We have numerically studied a model consisting of elements with intracellular dynamics, random walks with a state-dependent…

统计力学 · 物理学 2007-10-31 Masayo Inoue , Kunihiko Kaneko

Collective cell migration in response to a chemical cue occurs in many biological processes such as morphogenesis and cancer metastasis. Clusters of migratory cells in these systems are capable of responding to gradients of less than 1%…

生物物理 · 物理学 2016-08-24 Julien Varennes , Bumsoo Han , Andrew Mugler

The large scale behaviour of a population of cells that grow and interact through the concentration field of the chemicals they secrete is studied using dynamical renormalization group methods. The combination of the effective long-range…

细胞行为 · 定量生物学 2015-01-19 Anatolij Gelimson , Ramin Golestanian

We study the universal behavior of a class of active colloids whose design is inspired by the collective dynamics of natural systems like schools of fish and flocks of birds. These colloids, with off-center repulsive interaction sites,…

软凝聚态物质 · 物理学 2024-10-10 Amir Nourhani

Emergent cooperative functionality in active matter systems plays a crucial role in various applications of active swarms, ranging from pollutant foraging and collective threat detection to tissue embolization. In nature, animals like bats…

软凝聚态物质 · 物理学 2025-05-26 Alexander Ziepke , Ivan Maryshev , Igor S. Aranson , Erwin Frey

In nature, bacterial collectives typically consist of multiple species, which are interacting both biochemically and physically. Nonetheless, past studies on the physical properties of swarming bacteria were focused on axenic (single…

生物物理 · 物理学 2022-06-15 Ajesh Jose , Gil Ariel , Avraham Be'er

When an ensemble of self-propelled camphor boats move in a one-dimensional channel, they exhibit a variety of collective behaviors. Under certain conditions, the boats tend to cluster together and move in a relatively tight formation. This…

软凝聚态物质 · 物理学 2012-05-09 Eric Heisler , Nobuhiko J. Suematsu , Akinori Awazu , Hiraku Nishimori

Bacterial swarming is a rapid mass-migration, in which thousands of cells spread collectively to colonize a surface. Physically, swarming is a natural example of active particles that use energy to generate motion. Accordingly,…

A striking feature of the collective behavior of spherical microswimmers is that for sufficiently strong self-propulsion they phase-separate into a dense cluster coexisting with a low-density dis- ordered surrounding. Extending our previous…

软凝聚态物质 · 物理学 2016-10-31 Johannes Blaschke , Maurice Maurer , Karthik Menon , Andreas Zöttl , Holger Stark

An interacting pair of chemotactic (anti-chemotactic) active colloids, that can rotate their axes of self-propulsion to align {parallel (anti-parallel)} to a chemical gradient, shows dynamical behaviour that varies from bound states to…

生物物理 · 物理学 2025-10-08 Suropriya Saha , Sriram Ramaswamy , Ramin Golestanian
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