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Cell experiments with large, short electric field pulses of opposite polarity reveal a remarkable phenomenon: Bipolar cancellation (BPC). Typical defining experiments involve quantitative observation of tracer molecule influx at times of…

生物物理 · 物理学 2019-04-02 Julie V. Stern , Thiruvallur R. Gowrishankar , Kyle C. Smith , James C. Weaver

We model and simulate a nanopore sensor that selectively binds analyte ions. This binding leads to the modulation of the local concentrations of the ions of the background electrolyte (KCl), and, thus, to the modulation of the ionic current…

应用物理 · 物理学 2019-11-07 Eszter Mádai , Mónika Valiskó , Dezső Boda

Throughout our history, we, humans, have sought to better control and understand our environment. To this end, we have extended our natural senses with a host of sensors-tools that enable us to detect both the very large, such as the…

生物物理 · 物理学 2023-06-09 Kherim Willems

Bipolar nanochannels comprising two domains of positively and negatively charged walls along the pore axis are known to rectify current when exposed to an electric potential bias. We find that addition of charged nanoparticles can increase…

Standard model of electropration (EP) has long emphasized a single pore lifetime to explain post-pulse transport across cell membranes. However, pore lifetimes estimated from molecular dynamics (MD) models and and those measured from…

生物物理 · 物理学 2017-10-11 Thiruvallur R. Gowrishankar , Julie V. Stern , James C. Weaver

We consider elongated cylindrical particles, modeling e.g. DNA fragments or nano-rods, while translocating under the action of an externally applied voltage through a solid state nanopore. Particular emphasis is put on the concomitant…

软凝聚态物质 · 物理学 2013-07-15 Sebastian Getfert , Thomas Töws , Peter Reimann

We describe a concept that has the potential to change how we think about the underlying mechanisms of cell membrane electroporation (EP). Prior experimental, theoretical and modeling have emphasized a single pore lifetime as adequate for…

生物物理 · 物理学 2017-08-28 Julie V. Stern , Thiruvallur R. Gowrishankar , Kyle C. Smith , James C. Weaver

This paper presents a model and numerical analysis (simulations) of transmembrane potential induced in biological cell membrane under the influence of externally applied electric field (i.e., electroporation). This model differs from the…

生物物理 · 物理学 2009-11-13 Pratip Shil , Salil Bidaye , Pandit B. Vidyasagar

We investigate a model nanopore sensor that is able to detect analyte ions that are present in the electrolyte solution in very small concentrations. The nanopore selectively binds the analyte ions with which the local concentrations of the…

应用物理 · 物理学 2018-12-31 Eszter Mádai , Mónika Valiskó , Dezső Boda

Cued and un-cued cell polarization is a fundamental mechanism in cell biology. As an alternative to the classical Turing bifurcation, it has been proposed that the cell polarity might onset by means of the well-known phenomenon of…

分子网络 · 定量生物学 2015-06-12 Sebastiano de Franciscis , Alberto d'Onofrio

Nanopore-based sensing platforms have transformed single-molecule detection and analysis. The foundation of nanopore translocation experiments lies in conductance measurements, yet existing models, which are largely phenomenological, are…

生物物理 · 物理学 2023-12-19 Arjav Shah , Shakul Pathak , Slaven Garaj , Martin Z. Bazant , Ankur Gupta , Patrick S. Doyle

Controlled breakdown has recently emerged as a highly appealing technique to fabricate solid-state nanopores for a wide range of biosensing applications. This technique relies on applying an electric field of approximately 0.6-1 V/nm across…

Using the hypernetted-chain/mean spherical approximation (HNC/MSA) integral equations we study the electrical double layer inside and outside a model charged cylindrical vesicle (nanopore) immersed into a primitive model macroions solution,…

介观与纳米尺度物理 · 物理学 2017-10-04 E. González-Tovar , M. Lozada-Cassou

Interactions between crawling cells, which are essential for many biological processes, can be quantified by measuring cell-cell collisions. Conventionally, experiments of cell-cell collisions are conducted on two-dimensional flat…

生物物理 · 物理学 2025-10-24 Yongtian Luo , Amrinder S. Nain , Brian A. Camley

A nanocomposite film containing highly polarizable inclusions in a fluid background is explored when an external electric field is applied perpendicular to the planar film. For small electric fields, the induced dipole moments of the…

软凝聚态物质 · 物理学 2025-06-27 Elshad Allahyarov , Hartmut Löwen

Due to the potential applications in biomedical engineering, it becomes more and more important to understand the process of engulfment and internalization of nanoparticles (NPs) by cell membranes. Despite the fact that the interaction…

生物物理 · 物理学 2023-12-12 Ke Xiao , Jing Li , Rui Ma , Chen-Xu Wu

Reverse osmosis and nanofiltration are membrane-based methods that remove solutes from solvent, for instance they remove salts from water (desalination). In these methods, an applied pressure is the driving force for solvent to pass the…

化学物理 · 物理学 2024-01-23 P. M. Biesheuvel , S. Porada , B. Blankert , I. Ryzhkov , M. Elimelech

Mechanical cues from the extracellular microenvironment play a central role in regulating the structure, function and fate of living cells. Nevertheless, the precise nature of the mechanisms and processes underlying this crucial cellular…

生物物理 · 物理学 2015-06-23 Ariel Livne , Eran Bouchbinder , Benjamin Geiger

A field theoretic variational approach is introduced to study ion penetration into water-filled cylindrical nanopores in equilibrium with a bulk reservoir. It is shown that (i) an ion located in a neutral pore undergoes two opposing…

软凝聚态物质 · 物理学 2015-05-19 Sahin Buyukdagli , Manoel Manghi , John Palmeri

We demonstrate a method of concentrating and patterning of biological cells on a chip, exploiting the confluence of electric and thermal fields, without necessitating the use of any external heating or illuminating source. The technique…

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