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Cytoskeletal networks are foundational examples of active matter and central to self-organized structures in the cell. In vivo, these networks are active and heavily crosslinked. Relating their large-scale dynamics to properties of their…

In nature interactions between biopolymers and motor proteins give rise to biologically essential emergent behaviours. Besides cytoskeleton mechanics, active nematics arise from such interactions. Here we present a study on 3D active…

The fate of every eukaryotic cell subtly relies on the exceptional mechanical properties of microtubules. Despite significant efforts, understanding their unusual mechanics remains elusive. One persistent, unresolved mystery is the…

软凝聚态物质 · 物理学 2015-06-19 Falko Ziebert , Hervé Mohrbach , Igor M. Kulić

Microtubules are protein polymers that form "molecular highways" for long-range transport within living cells. Molecular motors actively step along microtubules to shuttle cellular materials between the nucleus and the cell periphery; this…

生物大分子 · 定量生物学 2016-10-06 Winnie H. Liang , Qiaochu Li , K. M. Rifat Faysal , Stephen J. King , Ajay Gopinathan , Jing Xu

We investigate the dynamics of an active gel of bundled microtubules that is driven by clusters of kinesin molecular motors. Upon the addition of ATP, the coordinated action of thousands of molecular motors drives the gel to a highly…

软凝聚态物质 · 物理学 2015-06-23 Gil Henkin , Stephen J. DeCamp , Daniel TN Chen , Tim Sanchez , Zvonimir Dogic

We analyze the nonlinear waves that propagate on a microtubule that is tethered at its minus end due to kinesin walking on it, as is seen during the fluid mixing caused by cytoplasmic streaming in Drosophila oocytes.The model we use assumes…

生物大分子 · 定量生物学 2012-07-11 J. M. Deutsch , M. E. Brunner , William M. Saxton

Mixtures of microtubules and molecular motors form active materials with diverse dynamical behaviors that vary based on their constituents' molecular properties. We map the non-equilibrium phase diagram of microtubules and tip-accumulating…

软凝聚态物质 · 物理学 2021-08-04 Bezia Lemma , Noah P. Mitchell , Radhika Subramanian , Daniel J. Needleman , Zvonimir Dogic

How chirality propagates across scales remains an open question in many biological and synthetic systems. An especially clear manifestation of this propagation is found in in vitro gliding assays of cytoskeletal filaments on surfaces,…

The cytoskeleton is regulated by a plethora of enzymes that influence the stability and dynamics of cytoskeletal filaments. Molecular motors of the kinesin-8 protein family depolymerise microtubules in a length-dependent manner, and…

亚细胞过程 · 定量生物学 2014-10-29 Louis Reese , Anna Melbinger , Erwin Frey

In this study we formulate a theoretical approach, based on a Boltzmann-like kinetic equation, to describe pattern formation in two-dimensional mixtures of microtubular filaments and molecular motors. Following the previous work by Aranson…

软凝聚态物质 · 物理学 2018-02-28 Ivan Maryshev , Davide Marenduzzo , Andrew B. Goryachev , Alexander Morozov

Two headed motor proteins, such as kinesin and dynein, hidrolyze environmental ATP in order to propel unidirectionally along cytoskeletal filaments such as microtubules. In the case of kinesin, protein heads bind primarily on the alpha…

统计力学 · 物理学 2007-05-23 G. P. Tsironis , K. Lindenberg

We analyze experimental observations of microtubules undergoing small fluctuations about a "balance point" when mixed in solution of two different kinesin motor proteins, KLP61F and Ncd. It has been proposed that the microtubule movement is…

细胞行为 · 定量生物学 2013-07-24 J. M. Deutsch , Ian P. Lewis

Microtubules self-organize to form part of the cellular cytoskeleton. They give cells their shape and play a crucial role in cell division and intracellular transport. Strikingly, microtubules driven by motor proteins reorganize into stable…

适应与自组织系统 · 物理学 2024-05-16 Nikita Frolov , Bram Bijnens , Daniel Ruiz-Reynés , Lendert Gelens

Kinesin motors can induce a buckling instability in a microtubule with a fixed minus end. Here we show that by modifying the surface with a protein-repellent functionalization and using clusters of kinesin motors, the microtubule can…

Microtubules have been in biophysical focus for several decades. Yet the confusing and mutually contradicting results regarding their elasticity and fluctuations have shed some doubts on their present understanding. In this paper we expose…

软凝聚态物质 · 物理学 2011-11-22 Hervé Mohrbach , Albert Johner , Igor M. Kulić

The kinesin superfamily of motor proteins is a major driver of anterograde transport of vesicles and organelles within eukaryotic cells via microtubules. Numerous studies have elucidated the step-size, velocities, forces, and navigation…

生物大分子 · 定量生物学 2024-10-07 Mason Grieb , Nimisha Krishnan , Jennifer L. Ross

Many cellular processes rely on the cell's ability to transport material to and from the nucleus. Networks consisting of many microtubules and actin filaments are key to this transport. Recently, the inhibition of intracellular transport…

亚细胞过程 · 定量生物学 2020-05-06 Shawn D. Ryan , Zachary McCarthy , Mykhailo Potomkin

Microtubules are a major component of the cytoskeleton distinguished by highly dynamic behavior both in vitro and in vivo. We propose a general mathematical model that accounts for the growth, catastrophe, rescue and nucleation processes in…

生物物理 · 物理学 2015-05-13 Peter Hinow , Vahid Rezania , Jack A. Tuszynski

Cell shape changes are largely controlled by the actin cytoskeleton, a dynamic filament network beneath the plasma membrane. Several cell types can form extended free-standing protrusions not supported by an extracellular substrate or…

软凝聚态物质 · 物理学 2025-10-21 Kristiana Mihali , Dennis Wörthmüller , Pierre Sens

In the presence of ATP, kinesin proceeds along the protofilament of microtubule by alternated binding of two motor domains on the tubulin binding sites. Since the processivity of kinesin is much higher than other motor proteins, it has been…

生物大分子 · 定量生物学 2009-11-13 Changbong Hyeon , Jose N. Onuchic
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