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Understanding how an extinction event affects ecosystem is fundamental to biodiversity conservation. For this reason, food web response to species loss has been investigated in several ways in the last years. Several studies focused on…

种群与进化 · 定量生物学 2011-11-07 Michele Bellingeri

We investigate how the properties of epidemic networks change depending on the availability of different types of data on a disease outbreak. This is achieved by introducing mathematical and computational methods that estimate the…

计算物理 · 物理学 2025-09-03 Oscar Fajardo-Fontiveros , Carl J. E. Suster , Eduardo G. Altmann

A classic measure of ecological stability describes the tendency of a community to return to equilibrium after small perturbation. While many advances show how the network structure of these communities severely constrains such tendencies,…

种群与进化 · 定量生物学 2015-06-09 Gang Yan , Neo D. Martinez , Yang-Yu Liu

We develop a stochastic, individual-based model for food web simulation which in the large-population limit reduces to the well-studied Webworld model, which has been used to successfully construct model food webs with several realistic…

种群与进化 · 定量生物学 2008-08-29 Craig R. Powell , Richard P. Boland

Effects of changes in functional composition of soil communities on nutrient cycling are still not well understood. Models simulating community dynamics overcome the technical challenges of conducting species removal experiments in the…

种群与进化 · 定量生物学 2019-02-13 Idaline Laigle , Isabelle Aubin , Dominique Gravel

The overwhelming success of the web 2.0, with online social networks as key actors, has induced a paradigm shift in the nature of human interactions. The user-driven character of these services for the first time has allowed researchers to…

物理与社会 · 物理学 2015-05-22 Kaj-Kolja Kleineberg , Marián Boguñá

The inference of the interactions between organisms in an ecosystem from observational data is an important problem in ecology. This paper presents a mathematical inference method, originally developed for the inference of biochemical…

种群与进化 · 定量生物学 2008-05-12 Paola Vera-Licona , Reinhard Laubenbacher

The network of interactions in complex systems, strongly influences their resilience, the system capability to resist to external perturbations or structural damages and to promptly recover thereafter. The phenomenon manifests itself in…

物理与社会 · 物理学 2018-04-11 Malbor Asllani , Timoteo Carletti

Food webs -- networks of predators and prey -- have long been known to exhibit "intervality": species can generally be ordered along a single axis in such a way that the prey of any given predator tend to lie on unbroken compact intervals.…

种群与进化 · 定量生物学 2016-06-29 Virginia Domínguez-García , Samuel Johnson , Miguel A. Muñoz

The distributions of species lifetimes and species in space are related, since species with good local survival chances have more time to colonize new habitats and species inhabiting large areas have higher chances to survive local…

种群与进化 · 定量生物学 2019-02-18 Tobias Rogge , David Jones , Barbara Drossel , Korinna T. Allhoff

An agent-based model of population dynamics is presented. The model has as its expected behaviour the population dynamics of the equation-based Webworld model, within which large communities of species can be grown on evolutionary time…

种群与进化 · 定量生物学 2008-11-18 Craig R. Powell

The robustness of an ecological network quantifies the resilience of the ecosystem it represents to species loss. It corresponds to the proportion of species that are disconnected from the rest of the network when extinctions occur…

种群与进化 · 定量生物学 2021-11-25 Saint-Clair Chabert-Liddell , Pierre Barbillon , Sophie Donnet

We investigate in detail the model of a trophic web proposed by Amaral and Meyer [Phys. Rev. Lett. 82, 652 (1999)]. We focused on small-size systems that are relevant for real biological food webs and for which the fluctuations are playing…

种群与进化 · 定量生物学 2009-11-13 A. Pȩkalski , J. Szwabiński , I. Bena , M. Droz

Body size or mass is one of the main factors underlying food webs structure. A large number of evolutionary models have shown that indeed, the adaptive evolution of body size (or mass) can give rise to hierarchically organised trophic…

种群与进化 · 定量生物学 2021-08-27 Coralie Fritsch , Sylvain Billiard , Nicolas Champagnat

Metacommunity theory is considered a promising approach for explaining species diversity and food web complexity. Recently Pillai et al. proposed a simple modeling framework for the dynamics of food webs at the metacommunity level. Here, we…

种群与进化 · 定量生物学 2012-12-21 Gesa A. Böhme , Thilo Gross

Synergistic and antagonistic interactions in multi-species populations - such as resource sharing and competition - result in remarkably diverse behaviors in populations of interacting cells, such as in soil or human microbiomes, or clonal…

种群与进化 · 定量生物学 2019-10-15 MattheW Badali , Anton Zilman

Real food web data available in the literature presents us with the relations between various species, sizes of these species, metabolic types of the species and other useful information, which allows us to define parameters for the…

种群与进化 · 定量生物学 2016-10-25 Alexander Pimenov

We synthesise traditional unstructured food webs, allometric body size scaling, trait-based modelling, and physiologically structured modelling to provide a novel and ecologically relevant tool for size-structured food webs. The framework…

种群与进化 · 定量生物学 2015-03-14 Martin Hartvig , Ken H. Andersen , Jan E. Beyer

Global, population-wide oscillations in models of cyclic dominance may result in the collapse of biodiversity due to the accidental extinction of one species in the loop. Previous research has shown that such oscillations can emerge if the…

种群与进化 · 定量生物学 2016-12-14 Attila Szolnoki , Matjaz Perc

Food webs are networks describing who is eating whom in an ecological community. By now it is clear that many aspects of food-web structure are reproducible across diverse habitats, yet little is known about the driving force behind this…

种群与进化 · 定量生物学 2007-05-23 A. G. Rossberg , H. Matsuda , T. Amemiya , K. Itoh