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Mechanosensitive channels are ion channels activated by membrane tension. We investigate the influence of bacterial mechanosensitive channels spatial distribution on activation (gating). Based on elastic short-range interactions we map this…

生物物理 · 物理学 2020-03-24 Ksenia Guseva , Marco Thiel , Ian Booth , Samantha Miller , Celso Grebogi , Alessandro de Moura

For ion channel gating, the appearance of two distinct conformational states and the discrete transitions between them is essential, and therefore of crucial importance to all living organisms. We show that the physical interplay between…

软凝聚态物质 · 物理学 2015-06-19 Douwe Jan Bonthuis , Ramin Golestanian

Ion channels orchestrate the communication between cells and their environment. These are special proteins capable of changing their shape to allow ions to pass through membranes in response to stimuli like membrane tension. As the letters…

生物物理 · 物理学 2024-09-17 Uğur Çetiner

Rapid changes in extracellular osmolarity are one of many insults microbial cells face on a daily basis. To protect against such shocks, Escherichia coli and other microbes express several types of transmembrane channels which open and…

细胞行为 · 定量生物学 2018-06-05 Griffin Chure , Heun Jin Lee , Rob Phillips

Much progress has been made in elucidating the inner workings of voltage-gated ion channels, but less understood is the influence of lipid rafts on gating kinetics. Here we propose that state-dependent channel affinity for different lipid…

软凝聚态物质 · 物理学 2024-01-23 Antonio Suma , Daniel Sigg , Seamus Gallagher , Giuseppe Gonnella , Vincenzo Carnevale

We propose and study a model of hypothetical magnetosensitive ionic channels which are long thought to be a possible candidate to explain the influence of weak magnetic fields on living organisms ranging from magnetotactic bacteria to…

生物物理 · 物理学 2016-03-07 Igor Goychuk

The movement of ionic solutions is an essential part of biology and technology. Fluidics, from nano- to micro- to microfluidics, is a burgeoning area of technology which is all about the movement of ionic solutions, on various scales. Many…

定量方法 · 定量生物学 2018-06-08 Shixin Xu , Bob Eisenberg , Zilong Song , Huaxiong Huang

Biologically important membrane channels are gated by force at attached tethers. Here, we generically characterize the non-trivial interplay of force, membrane tension, and channel deformations that can affect gating. A central finding is…

生物物理 · 物理学 2017-07-28 Benedikt Sabass , Howard A. Stone

Ion channels are proteins with a hole down the middle embedded in cell membranes. Membranes form insulating structures and the channels through them allow and control the movement of charged particles, spherical ions, mostly Na+, K+, Ca++,…

生物大分子 · 定量生物学 2015-05-11 Bob Eisenberg

Mechanosensitive ion nanochannels regulate transport by undergoing conformational changes within nanopores. However, achieving precise control over these conformational states remains a major challenge for both artificial soft or solid…

化学物理 · 物理学 2026-01-06 Ke Zhou

We introduce a novel model for active particles with short-range aligning interactions and study their behaviour in crowded environments using numerical simulations. When only active particles are present, we observe a transition from a…

计算物理 · 物理学 2017-12-06 Simon Nilsson , Giovanni Volpe

Voltage-gated ion channels are key molecules for the generation and propagation of electrical signals in excitable cell membranes. The voltage-dependent switching of these channels between conducting and nonconducting states is a major…

生物物理 · 物理学 2009-09-10 Riza Erdem , Ekrem Aydiner

Biological membranes are elastic media in which the presence of a transmembrane protein leads to local bilayer deformation. The energetics of deformation allow two membrane proteins in close proximity to influence each other's equilibrium…

亚细胞过程 · 定量生物学 2015-06-26 Tristan Ursell , Kerwyn Huang , Eric Peterson , Rob Phillips

Ion channels are specific proteins present in the membranes of living cells. They control the flow of specific ions through a cell, initiated by an ion channel's electrochemical gradient. In doing so, they control important physiological…

亚细胞过程 · 定量生物学 2012-09-14 Andrew Das Arulsamy

Protein mechanosensitive channels (MS) are activated by tension transmitted through the lipid bilayer. We propose a theory of lateral stress relaxation in a bilayer lipid membrane exposed to external pressure pulse in the patch-clamp…

软凝聚态物质 · 物理学 2007-05-23 Sergei I. Mukhin , Svetlana V. Baoukina

Voltage-activated ion channels vary randomly between open and closed states, influenced by the membrane potential and other factors. Signal transduction is enhanced by noise in a simple ion channel model. The enhancement occurs in a finite…

生物物理 · 物理学 2007-05-23 Michael J. Barber , Manfred L. Ristig

The flow of amorphous solids results from a combination of elastic deformation and local structural rearrangements, which induce non-local elastic deformations. These elements are incorporated into a mechanically-consistent mesoscopic model…

软凝聚态物质 · 物理学 2015-06-12 Alexandre Nicolas , Jean-Louis Barrat

An essential property of layered systems is the dynamical nature of the screened Coulomb interaction. Low energy collective modes appear as a consequence of the layering and provide for a superconducting-pairing channel in addition to the…

超导电性 · 物理学 2009-11-07 A. Bill , H. Morawitz , V. Z. Kresin

Molecular Communication (MC) architectures suffer from molecular build-up in the channel if they do not have appropriate reuptake mechanisms. The molecular build-up either leads to intersymbol interference (ISI) or reduces the transmission…

分子网络 · 定量生物学 2024-02-27 Caglar Koca , Ozgur B. Akan

Most sensory cells use surface receptors to detect environmental stimuli and initiate downstream signaling. Cooperative interactions among sensory receptors is known to play a crucial role in enhancing the sensitivity of biochemical…

分子网络 · 定量生物学 2014-01-15 Jianmin Sun , Michael Grabe
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