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Gaussian and discrete non-Gaussian spatial datasets are common across fields like public health, ecology, geosciences, and social sciences. Bayesian spatial generalized linear mixed models (SGLMMs) are a flexible class of models for…

统计方法学 · 统计学 2025-01-27 Jin Hyung Lee , Ben Seiyon Lee

Now over 20 years old, functional MRI (fMRI) has a large and growing literature that is best synthesised with meta-analytic tools. As most authors do not share image data, only the peak activation coordinates (foci) reported in the paper…

统计方法学 · 统计学 2016-06-23 Silvia Montagna , Tor Wager , Lisa Feldman-Barrett , Timothy D. Johnson , Thomas E. Nichols

Functional magnetic resonance imaging (fMRI) plays a crucial role in neuroimaging, enabling the exploration of brain activity through complex-valued signals. These signals, composed of magnitude and phase, offer a rich source of information…

统计方法学 · 统计学 2024-01-15 Zhengxin Wang , Daniel B. Rowe , Xinyi Li , D. Andrew Brown

This article introduces an R package to perform statistical analysis for task-based fMRI data at both individual and group levels. The analysis to detect brain activation at the individual level is based on modeling the fMRI signal using…

应用统计 · 统计学 2021-11-03 Johnatan Cardona Jiménez

Bayesian statistical inference for Generalized Linear Models (GLMs) with parameters lying on a constrained space is of general interest (e.g., in monotonic or convex regression), but often constructing valid prior distributions supported on…

统计方法学 · 统计学 2021-09-02 Rahul Ghosal , Sujit K. Ghosh

Functional magnetic resonance imaging (fMRI) has provided invaluable insight into our understanding of human behavior. However, large inter-individual differences in both brain anatomy and functional localization after anatomical alignment…

应用统计 · 统计学 2021-11-03 Guoqing Wang , Abhirup Datta , Martin A. Lindquist

Generalized linear models (GLMs) are routinely used for modeling relationships between a response variable and a set of covariates. The simple form of a GLM comes with easy interpretability, but also leads to concerns about model…

统计方法学 · 统计学 2023-11-10 Davide Agnoletto , Tommaso Rigon , David B. Dunson

In addressing the challenge of analysing the large-scale Adolescent Brain Cognition Development (ABCD) fMRI dataset, involving over 5,000 subjects and extensive neuroimaging data, we propose a scalable Bayesian scalar-on-image regression…

统计方法学 · 统计学 2024-03-21 Anna Menacher , Thomas E. Nichols , Timothy D. Johnson , Jian Kang

In this paper, we introduce a new Bayesian approach for analyzing task fMRI data that simultaneously detects activation signatures and background connectivity. Our modeling involves a new hybrid tensor spatial-temporal basis strategy that…

应用统计 · 统计学 2023-12-04 Michelle F. Miranda , Jeffrey S. Morris

Generalized linear mixed models (GLMM) are used for inference and prediction in a wide range of different applications providing a powerful scientific tool. An increasing number of sources of data are becoming available, introducing a…

统计计算 · 统计学 2019-03-19 Aliaksandr Hubin , Geir Storvik

Inference for spatial generalized linear mixed models (SGLMMs) for high-dimensional non-Gaussian spatial data is computationally intensive. The computational challenge is due to the high-dimensional random effects and because Markov chain…

统计计算 · 统计学 2018-10-09 Yawen Guan , Murali Haran

Multivariate analysis of fMRI data has benefited substantially from advances in machine learning. Most recently, a range of probabilistic latent variable models applied to fMRI data have been successful in a variety of tasks, including…

Bayesian Generalized Nonlinear Models (BGNLM) offer a flexible nonlinear alternative to GLM while still providing better interpretability than machine learning techniques such as neural networks. In BGNLM, the methods of Bayesian Variable…

统计计算 · 统计学 2023-12-29 Jon Lachmann , Aliaksandr Hubin

There remains an open question about the usefulness and the interpretation of Machine learning (MLE) approaches for discrimination of spatial patterns of brain images between samples or activation states. In the last few decades, these…

机器学习 · 统计学 2022-09-22 JM Gorriz , R. Martin-Clemente , C. G. Puntonet , A. Ortiz , J. Ramirez , J. Suckling

The spatial lag model (SLM) has been widely studied in the literature for spatialised data modeling in various disciplines such as geography, economics, demography, regional sciences, etc. This is an extension of the classical linear model…

统计方法学 · 统计学 2019-08-08 Alassane Aw , Emmanuel Nicolas Cabral

Active contour models have been widely used in image segmentation, and the level set method (LSM) is the most popular approach for solving the models, via implicitly representing the contour by a level set function. However, the LSM suffers…

计算机视觉与模式识别 · 计算机科学 2021-05-10 Jun Ma , Dong Wang , Xiao-Ping Wang , Xiaoping Yang

Although a recent study suggested that coarse-to-fine learning provides a fast and flexible framework for large-scale spatial process modeling, the method was originally developed for Gaussian responses, limiting its applicability. To…

Coordinate-based meta-analysis combines evidence from a collection of Neuroimaging studies to estimate brain activation. In such analyses, a key practical challenge is to find a computationally efficient approach with good statistical…

Functional connectivity (FC) derived from resting-state fMRI plays a critical role in personalized predictions such as age and cognitive performance. However, applying foundation models(FM) to fMRI data remains challenging due to its high…

神经元与认知 · 定量生物学 2025-08-26 Yanwen Wang , Xinglin Zhao , Yijin Song , Xiaobo Liu , Yanrong Hao , Rui Cao , Xin Wen

Modeling spatial processes that exhibit both smooth and rough features poses a significant challenge. This is especially true in fields where complex physical variables are observed across spatial domains. Traditional spatial techniques,…

统计方法学 · 统计学 2024-10-30 Matthew Hofkes , Douglas Nychka