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Optical microscopy provides rich spatio-temporal information characterizing in vivo molecular motion. However, effective forces and other parameters used to summarize molecular motion change over time in live cells due to latent state…

定量方法 · 定量生物学 2015-11-06 Christopher P. Calderon , Kerry S. Bloom

Driven barrier crossings are pervasive in optical-trapping experiments and steered molecular-dynamics simulations. Despite the high fidelity of control, the freedom in the choice of driving protocol is rarely exploited to improve…

统计力学 · 物理学 2022-07-06 Steven Blaber , David A. Sivak

Computational modelling has made many useful contributions to the field of optical tweezers. One aspect in which it can be applied is the simulation of the dynamics of particles in optical tweezers. This can be useful for systems with many…

Heterogeneity in biological molecules, resulting in molecule-to-molecule variations in their dynamics and function, is an emerging theme. To elucidate the consequences of heterogeneous behavior at the single molecule level, we propose an…

生物物理 · 物理学 2017-01-24 Changbong Hyeon , Michael Hinczewski , D. Thirumalai

In this contribution, a design of a synthetic calibration genetic circuit to characterize the relative strength of different sensing promoters is proposed and its specifications and performance are analyzed via an effective mathematical…

In this work, we present the integrated structure-control design of a 2-DOF underactuated mechanical system, aiming to achieve a periodic motion of the end-effector. The desired behavior is generated via input-output linearization, followed…

系统与控制 · 电气工程与系统科学 2020-06-02 Andrea Tilli , Alessandro Bosso , Elena Ruggiano , Alessandro Samorì

We study a class of structured optimal control problems in which the main diagonal of the dynamic matrix is a linear function of the design variable. While such problems are in general challenging and nonconvex, for positive systems we…

最优化与控制 · 数学 2019-07-09 Neil K. Dhingra , Marcello Colombino , Mihailo R. Jovanović

This paper develops a sliding mode control based frame work for equality constrained optimization by reformulation the first order Karush Kuhn Tucker conditions as control affine dynamical system. The optimization variables are treated as…

最优化与控制 · 数学 2026-05-01 Shyam Kamal , Baby Diana , Sunidhi Pandey , Sandip Ghosh , Thach Ngoc Dinh

Tensor-based discrete density estimation requires flexible modeling and proper divergence criteria to enable effective learning; however, traditional approaches using $\alpha$-divergence face analytical challenges due to the $\alpha$-power…

机器学习 · 统计学 2025-05-26 Kazu Ghalamkari , Jesper Løve Hinrich , Morten Mørup

The discovery of ferroelectricity in HfO$_2$-based thin films opens up new opportunities for using this silicon-compatible ferroelectric to realize low-power logic circuits and high-density non-volatile memories. The functional performances…

材料科学 · 物理学 2021-02-03 Jing Wu , Yuzhi Zhang , Linfeng Zhang , Shi Liu

The pel-recursive computation of 2-D optical flow has been extensively studied in computer vision to estimate motion from image sequences, but it still raises a wealth of issues, such as the treatment of outliers, motion discontinuities and…

计算机视觉与模式识别 · 计算机科学 2016-11-04 Vania V. Estrela , Matthias O. Franz , Ricardo T. Lopes , G. P. De Araujo

Small mechanical forces play important functional roles in many crucial cellular processes, including in the dynamical behavior of the cytoskeleton and in the regulation of osmotic pressure through membrane-bound proteins. Molecular…

化学物理 · 物理学 2023-10-20 Yuvraj Singh , Glen M. Hocky

Standard H-infinity/H2 robust control and analysis tools operate on uncertain parameters assumed to vary independently within prescribed bounds. This paper extends their capabilities in the presence of constraints coupling these parameters…

系统与控制 · 电气工程与系统科学 2026-02-18 Ervan Kassarian , Francesco Sanfedino , Daniel Alazard , Andrea Marrazza

We consider a class of infinite-dimensional singular stochastic control problems. These can be thought of as spatial monotone follower problems and find applications in spatial models of production and climate transition. Let…

最优化与控制 · 数学 2026-03-06 Salvatore Federico , Giorgio Ferrari , Frank Riedel , Michael Röckner

To create efficient-high performing processes, one must find an optimal design with its corresponding controller that ensures optimal operation in the presence of uncertainty. When comparing different process designs, for the comparison to…

系统与控制 · 电气工程与系统科学 2021-08-12 Steven Sachio , Max Mowbray , Maria Papathanasiou , Ehecatl Antonio del Rio-Chanona , Panagiotis Petsagkourakis

In model selection problems for machine learning, the desire for a well-performing model with meaningful structure is typically expressed through a regularized optimization problem. In many scenarios, however, the meaningful structure is…

最优化与控制 · 数学 2022-11-09 Jonathan Bunton , Paulo Tabuada

Optical tweezers (OTs) with structured light expand degrees of freedom of particle manipulation. However, the studies of structured optical tweezers are usually accompanied by complex theoretical models, strict simulation conditions, and…

光学 · 物理学 2024-12-05 Zhe Shen , Ning Liu

Biological neurons have adaptive nature and perform complex computations involving the filtering of redundant information. However, most common neural cell models, including biologically plausible, such as Hodgkin-Huxley or Izhikevich, do…

神经元与认知 · 定量生物学 2021-06-22 Oleg Nikitin , Olga Lukyanova , Alex Kunin

Standard optical tweezers rely on optical forces that arise when a focused laser beam interacts with a microscopic particle: scattering forces, which push the particle along the beam direction, and gradient forces, which attract it towards…

Red blood cells (RBCs) sustain mechanical stresses associated with microcirculatory flow through ATP-driven plasma membrane flickering. This is an active phenomenon driven by motor proteins that regulate interactions between the spectrin…