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Epidemic intelligence deals with the detection of disease outbreaks using formal (such as hospital records) and informal sources (such as user-generated text on the web) of information. In this survey, we discuss approaches for epidemic…

计算与语言 · 计算机科学 2019-03-15 Aditya Joshi , Sarvnaz Karimi , Ross Sparks , Cecile Paris , C Raina MacIntyre

The extraction of relevant data from Electronic Health Records (EHRs) is crucial to identifying symptoms and automating epidemiological surveillance processes. By harnessing the vast amount of unstructured text in EHRs, we can detect…

计算与语言 · 计算机科学 2025-02-10 Juliano Genari , Guilherme Tegoni Goedert

This paper presents a novel approach to epidemic surveillance, leveraging the power of Artificial Intelligence and Large Language Models (LLMs) for effective interpretation of unstructured big data sources, like the popular ProMED and WHO…

计算工程、金融与科学 · 计算机科学 2024-08-27 Sergio Consoli , Peter Markov , Nikolaos I. Stilianakis , Lorenzo Bertolini , Antonio Puertas Gallardo , Mario Ceresa

Problem lists are intended to provide clinicians with a relevant summary of patient medical issues and are embedded in many electronic health record systems. Despite their importance, problem lists are often cluttered with resolved or…

信息检索 · 计算机科学 2020-08-05 Justin Lovelace , Nathan C. Hurley , Adrian D. Haimovich , Bobak J. Mortazavi

The rapid evolution of artificial intelligence (AI), together with the increased availability of social media and news for epidemiological surveillance, are marking a pivotal moment in epidemiology and public health research. Leveraging the…

Disease control experts inspect public health data streams daily for outliers worth investigating, like those corresponding to data quality issues or disease outbreaks. However, they can only examine a few of the thousands of maximally-tied…

人工智能 · 计算机科学 2024-01-04 Ananya Joshi , Tina Townes , Nolan Gormley , Luke Neureiter , Roni Rosenfeld , Bryan Wilder

Providing accurate and reliable predictions about the future of an epidemic is an important problem for enabling informed public health decisions. Recent works have shown that leveraging data-driven solutions that utilize advances in deep…

机器学习 · 计算机科学 2023-11-21 Harshavardhan Kamarthi , B. Aditya Prakash

This study presents OpenExtract, an open-source pipeline for automated data extraction in large-scale systematic literature reviews. The pipeline queries large language models (LLMs) to predict data entries based on relevant sections of…

Tuberculosis (TB) remains a formidable global health challenge, driven by complex spatiotemporal transmission dynamics and influenced by factors such as population mobility and behavioral changes. We propose an Epidemic-Guided Deep Learning…

机器学习 · 计算机科学 2025-10-29 Madhab Barman , Madhurima Panja , Nachiketa Mishra , Tanujit Chakraborty

Containment of epidemic outbreaks entails great societal and economic costs. Cost-effective containment strategies rely on efficiently identifying infected individuals, making the best possible use of the available testing resources.…

种群与进化 · 定量生物学 2020-12-01 Laura Natali , Saga Helgadottir , Onofrio M. Marago , Giovanni Volpe

The epidemiology has recently witnessed great advances based on computational models. Its scope and impact are getting wider thanks to the new data sources feeding analytical frameworks and models. Besides traditional variables considered…

计算机与社会 · 计算机科学 2023-11-13 David Pastor-Escuredo

Early outbreak detection is a key aspect in the containment of infectious diseases, as it enables the identification and isolation of infected individuals before the disease can spread to a larger population. Instead of detecting unexpected…

机器学习 · 计算机科学 2021-10-19 Michael Rapp , Moritz Kulessa , Eneldo Loza Mencía , Johannes Fürnkranz

Forecasting infectious disease outbreaks is hard. Forecasting emerging infectious diseases with limited historical data is even harder. In this paper, we investigate ways to improve emerging infectious disease forecasting under operational…

Infectious diseases occur when pathogens from other individuals or animals infect a person, resulting in harm to both individuals and society as a whole. The outbreak of such diseases can pose a significant threat to human health. However,…

种群与进化 · 定量生物学 2024-10-24 Ghazaleh Babanejaddehaki , Aijun An , Manos Papagelis

The automation of the medical evidence acquisition and diagnosis process has recently attracted increasing attention in order to reduce the workload of doctors and democratize access to medical care. However, most works proposed in the…

计算与语言 · 计算机科学 2022-10-14 Arsene Fansi Tchango , Rishab Goel , Julien Martel , Zhi Wen , Gaetan Marceau Caron , Joumana Ghosn

Social media services such as Twitter are a valuable source of information for decision support systems. Many studies have shown that this also holds for the medical domain, where Twitter is considered a viable tool for public health…

The early detection of infectious disease outbreaks is a crucial task to protect population health. To this end, public health surveillance systems have been established to systematically collect and analyse infectious disease data. A…

应用统计 · 统计学 2019-02-27 Benedikt Zacher , Irina Czogiel

Augmentation of disease diagnosis and decision-making in healthcare with machine learning algorithms is gaining much impetus in recent years. In particular, in the current epidemiological situation caused by COVID-19 pandemic, swift and…

计算机与社会 · 计算机科学 2021-02-23 Leopold Franz , Yash Raj Shrestha , Bibek Paudel

Deep generative models have significantly advanced medical imaging analysis by enhancing dataset size and quality. Beyond mere data augmentation, our research in this paper highlights an additional, significant capacity of deep generative…

计算机视觉与模式识别 · 计算机科学 2024-10-18 Xiaodan Xing , Junzhi Ning , Yang Nan , Guang Yang
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