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相关论文: An In Vitro Nematic Model for Proliferating Cell C…

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During the morphogenesis of tissues and tumors, cells often interact with neighbors with different mechanical properties, but the understanding of its role is lacking. We use active Brownian Dynamics simulations to study a model co-culture…

软凝聚态物质 · 物理学 2021-01-07 Supravat Dey , Moumita Das

We consider a cellular monolayer, described using a vertex-based model, for which cells form a spatially disordered array of convex polygons that tile the plane. Equilibrium cell configurations are assumed to minimize a global energy…

细胞行为 · 定量生物学 2018-05-30 Alexander Nestor-Bergmann , Emma Johns , Sarah Woolner , Oliver E. Jensen

Starting from a particle model describing self-propelled particles interacting through nematic alignment, we derive a macroscopic model for the particle density and mean direction of motion. We first propose a mean-field kinetic model of…

数学物理 · 物理学 2019-10-08 Pierre Degond , Sara Merino-Aceituno

The emergence of long-range spatiotemporal order from intrinsic chaos is a central challenge in far-from-equilibrium physics. In active fluids, such as cytoskeletal networks driving cellular motion, self-generated flows typically produce…

We propose a coarse-grained theoretical model to capture the aging of microfluidic devices under different conditions including constant applied flow rate and constant applied pressure gradient. Microfluidic devices that sort cells by their…

软凝聚态物质 · 物理学 2022-05-19 Gess Kelly , Thomas G. Fai

Biological cells can actively tune their intracellular architecture according to their overall shape. Here we explore the rheological implication of such coupling in a minimal model of a dense cellular material where each cell exerts an…

软凝聚态物质 · 物理学 2022-04-13 Shao-Zhen Lin , Matthias Merkel , Jean-François Rupprecht

We undertake a comprehensive Monte Carlo (MC) study of the ordering kinetics in nematic liquid crystals (NLCs) in 3-dimensions $(d=3)$ by performing deep quenches from the isotropic $(T>T_c)$ to the nematic $(T<T_c)$ phase. The…

软凝聚态物质 · 物理学 2020-11-24 Nishant Birdi , Varsha Banerjee , Sanjay Puri

Mono-layers of stearic and behenic acids and mixtures of them in different proportions, deposited with the Langmuir-Blodgett technique, were used to study the alignment and the alignment dynamics in nematic liquid crystal cells. A…

软凝聚态物质 · 物理学 2009-10-30 V. S. U. Fazio , L. Komitov , S. T. Lagerwall

Long-term videomicroscopy and computer-aided statistical analysis were used to determine some characteristic parameters of in vitro cell motility and proliferation in three established cell lines derived from human glioblastoma tumors.…

生物物理 · 物理学 2007-05-23 B. Hegedus , A. Czirok , I. Fazekas , T. Babel , E. Madarasz , T. Vicsek

In this review, we discuss recent advances on the plasticity of cancer stem cells and highlight their relevance to understand the metastatic process and to guide therapeutic interventions. Recent results suggest that the strict hierarchical…

种群与进化 · 定量生物学 2017-05-16 Caterina A. M. La Porta , Stefano Zapperi

A transition from asymmetric to symmetric patterns in time-dependent extended systems is described. It is found that one dimensional cellular automata, started from fully random initial conditions, can be forced to evolve into complex…

元胞自动机与格子气 · 物理学 2007-05-23 J. R. Sanchez , R. Lopez-Ruiz

We have recorded the swarming-like collective migration of a large number of keratocytes (tissue cells obtained from the scales of goldfish) using long-term videomicroscopy. By increasing the overall density of the migrating cells, we have…

细胞行为 · 定量生物学 2009-11-13 Balint Szabo , Gergely J. Szollosi , Balazs Gonci , Zsofi Juranyi , David Selmeczi , Tamas Vicsek

We describe a 3D percolation-type approach to modeling of the processes of aging and certain other properties of tissues analyzed as systems consisting of interacting cells. Lattice sites are designated as regular (healthy) cells, senescent…

统计力学 · 物理学 2016-07-12 Vyacheslav Gorshkov , Vladimir Privman , Sergiy Libert

Cancer cells co-cultured in vitro reveal unexpected differential growth rates that classical exponential growth models cannot account for. Two non-interacting cell lines were grown in the same culture, and counts of each species were…

定量方法 · 定量生物学 2014-12-04 Agnès Hamon , Marie Tosolini , Bernard Ycart , Pont Frédéric , Jean-Jacques Fournié

Active nematics are the nonequilibrium analog of passive liquid crystals in which anisotropic units consume free energy to drive emergent behavior. Similar to liquid crystal (LC) molecules in displays, ordering and dynamics in active…

The distances over which biological molecules and their complexes can function range from a few nanometres, in the case of folded structures, to millimetres, for example during chromosome organization. Describing phenomena that cover such…

软凝聚态物质 · 物理学 2011-09-28 Changbong Hyeon , D. Thirumalai

Ordered polarity alignment of a cell population plays a vital role in biology, such as in hair follicle alignment and asymmetric cell division. Here, we propose a theoretical framework for the understanding of generic dynamical properties…

斑图形成与孤子 · 物理学 2016-12-13 Kaori Sugimura , Hiroshi Kori

We carry out Monte Carlo simulations to investigate the effect of molecular shape on liquid-crystal order. In our approach, each model mesogen consists of several soft spheres bonded rigidly together. The arrangement of the spheres may be…

软凝聚态物质 · 物理学 2009-11-07 J. Xu , R. L. B. Selinger , J. V. Selinger , R. Shashidhar

Cycling tissues such as the intestinal epithelium, germ line, and hair follicles, require a constant flux of differentiated cells. These tissues are maintained by a population of stem cells, which generate differentiated progenies and…

细胞行为 · 定量生物学 2013-05-20 Sahand Hormoz

We develop a stochastic framework for viral population dynamics at the cellular level that explicitly incorporates the replication cycle with random stage durations. The model is formulated as a structured birth-death process coupled with a…

种群与进化 · 定量生物学 2026-05-13 Seong Jun Park