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In recent years, molecular dynamics (MD) simulations have emerged as a pivotal tool for understanding the structure, dynamics, and phase behavior in charged soft matter systems. To explore phenomena across greater length and time scales in…

计算物理 · 物理学 2024-07-18 Benjamin Bobin Ye , Shensheng Chen , Zhen-Gang Wang

We demonstrate how an iterative method for potential inversion from distribution functions developed for simple liquid systems can be generalized to polymer systems. It uses the differences in the potentials of mean force between the…

软凝聚态物质 · 物理学 2007-05-23 Dirk Reith , Mathias Puetz , Florian Mueller-Plathe

In an attempt to extend the range of model jamming transitions, we simulate systems of athermal particles which attract when slightly overlapping. Following from recent work on purely repulsive systems, dynamics are neglected and relaxation…

软凝聚态物质 · 物理学 2007-05-23 D. A. Head

A defocusing imaging technique has been used as a diagnostic to identify binary agglomerates (dimers) in complex plasmas. Quasi-two-dimensional plasma crystal consisting of monodisperse spheres and binary agglomerates has been created where…

等离子体物理 · 物理学 2015-06-05 M. Chaudhuri , V. Nosenko , C. Knapek , U. Konopka , A. V. Ivlev , H. M. Thomas , G. E. Morfill

Based on large-scale Monte Carlo simulations on lattice the energy probability distribution functions are investigated for a large set of primary sequences in distinct models of copolymers at low temperatures below transitions to compacted…

软凝聚态物质 · 物理学 2007-05-23 Edward G. Timoshenko , Yuri A. Kuznetsov , Roman N. Basovsky

We have studied the conformational and scaling behaviors of a flexible dendrimer immersed in athermal or good solvents. A self-consistent field theory combined with a pre-averaged excluded volume potential representing the two-body…

软凝聚态物质 · 物理学 2018-08-30 Meng Shi , Yingzi Yang , Feng Qiu

Coarse-graining has become an area of tremendous importance within many different research fields. For molecular simulation, coarse-graining bears the promise of finding simplified models such that long-time simulations of large-scale…

化学物理 · 物理学 2019-09-04 Feliks Nüske , Lorenzo Boninsegna , Cecilia Clementi

Explicit simulations of fluid mixtures of highly size-dispersed particles are constrained by numerical challenges associated with identifying pair-interaction neighbors. Recent algorithmic developments have ameliorated these difficulties to…

软凝聚态物质 · 物理学 2022-12-07 Joseph M. Monti , Gary S. Grest

The standard model of classical Density Functional Theory for pair potentials consists of a hard-sphere functional plus a mean-field term accounting for long ranged attraction. However, most implementations using sophisticated Fundamental…

计算物理 · 物理学 2021-01-04 James F. Lutsko , Cédric Schoonen

Using a density functional based interface displacement model we determine the effective interaction potential between two spherical particles which are immersed in a homogeneous fluid such as the vapor phase of a one-component substance or…

软凝聚态物质 · 物理学 2009-10-31 C. Bauer , T. Bieker , S. Dietrich

We consider a ternary mixture of hard colloidal spheres, ideal polymer spheres, and rigid vanishingly thin needles, which model stretched polymers or colloidal rods. For this model we develop a geometry-based density functional theory,…

软凝聚态物质 · 物理学 2009-11-07 Matthias Schmidt , Alan R. Denton

We focus on finding a coarse grained description able to reproduce the thermodynamic behavior of a molecular system by using mesoparticles representing several molecules. Interactions between mesoparticles are modelled by an interparticle…

软凝聚态物质 · 物理学 2015-06-17 Gerome Faure , Jean-Bernard Maillet , Gabriel Stoltz

The early planetesimal growth proceeds through a sequence of sticking collisions of dust agglomerates. Very uncertain is still the relative velocity regime in which growth rather than destruction can take place. The outcome of a collision…

地球与行星天体物理 · 物理学 2013-01-17 Alexander Seizinger , Roland Speith , Wilhelm Kley

In the present study we are performing simulation of simple model of two patch colloidal particles undergoing irreversible diffusion limited cluster aggregation using patchy Brownian cluster dynamics. In addition to the irreversible…

软凝聚态物质 · 物理学 2017-10-26 Isha Malhotra , Sujin B. Babu

Theoretical concepts in condensed matter physics are typically verified and also developed by exploiting computer simulations mostly in simple models. Predictions based on these usually isotropic models are often at odds with measurement…

软凝聚态物质 · 物理学 2020-11-13 K. Koperwas , A. Grzybowski , M. Paluch

We investigate and provide optimal sets of reaction coordinates for mixed pairs of molecules displaying polar, uniaxial, or spherical symmetry in two and three dimensions. These coordinates are non-redundant, i.e., they implicitly involve…

统计力学 · 物理学 2017-05-01 Thomas Heinemann , Sabine H. L. Klapp

A fermion ground state energy functional is set up in terms of particle density, relative pair density, and kinetic energy tensor density. It satisfies a minimum principle if constrained by a complete set of compatibility conditions. A…

化学物理 · 物理学 2009-10-17 Bin Liu , Jerome K. Percus

We investigate, within a local density functional theory formalism, the interactions between like-charged polyions immersed in a confined electrolyte. We obtain a simple condition for a repulsive effective pair potential, that can be…

软凝聚态物质 · 物理学 2009-10-31 E. Trizac

Density-dependent diffusion is a widespread phenomenon in nature. We have examined the density-dependent diffusion behavior of some biological processes such as tumor growth and invasion [23]. Here, we extend our previous work by developing…

统计力学 · 物理学 2022-02-14 Ahmed M. Fouad , Marwa M. Fouad

The formalism based on Correlated Basis Functions (CBF) and the cluster-expansion technique has been recently employed to derive an effective interaction from a realistic nuclear Hamiltonian. One of the main objectives of the work described…

核理论 · 物理学 2016-03-08 Angela Mecca