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Graphical structure learning is an effective way to assess and visualize cross-biomarker dependencies in biomedical settings. Standard approaches to estimating graphs rely on conditional independence tests that may not be sensitive to…

统计方法学 · 统计学 2024-11-28 Zain Khan , Daniel Malinsky , Martin Picard , Alan A. Cohen , Columbia SOH Group , Ying Wei

Quantifying how genomic features influence different parts of an outcome distribution requires statistical tools that go beyond mean regression, especially in ultrahigh-dimensional settings. Motivated by the study of LINE-1 activity in…

统计方法学 · 统计学 2025-11-27 Sang Kyu Lee , Tongwu Zhang , Hyokyoung G. Hong , Haolei Weng

Genome-wide association studies (GWAS) have led to the discovery of numerous single nucleotide polymorphisms (SNPs) associated with various phenotypes and complex diseases. However, the identified genetic variants do not fully explain the…

统计方法学 · 统计学 2025-07-09 Dayeon Jung , Yewon Kim , Junyong Park

Algorithms that ensure reproducible findings from large-scale, high-dimensional data are pivotal in numerous signal processing applications. In recent years, multivariate false discovery rate (FDR) controlling methods have emerged,…

统计方法学 · 统计学 2024-01-31 Jasin Machkour , Michael Muma , Daniel P. Palomar

We develop a new class of distribution--free multiple testing rules for false discovery rate (FDR) control under general dependence. A key element in our proposal is a symmetrized data aggregation (SDA) approach to incorporating the…

统计方法学 · 统计学 2021-05-27 Lilun Du , Xu Guo , Wenguang Sun , Changliang Zou

In many scenarios such as genome-wide association studies where dependences between variables commonly exist, it is often of interest to infer the interaction effects in the model. However, testing pairwise interactions among millions of…

统计方法学 · 统计学 2022-09-02 Jingyi Duan , Yang Ning , Xi Chen , Yong Chen

In modern scientific research, the objective is often to identify which variables are associated with an outcome among a large class of potential predictors. This goal can be achieved by selecting variables in a manner that controls the the…

统计方法学 · 统计学 2023-10-10 Yushu Shi , Michael Martens

False discovery rate (FDR) controlling procedures provide important statistical guarantees for the replicability in signal identification based on multiple hypotheses testing. In many fields of study, FDR controlling procedures are used in…

统计方法学 · 统计学 2022-10-04 Ran Dai , Cheng Zheng

Multiple hypothesis testing is a fundamental problem in high dimensional inference, with wide applications in many scientific fields. In genome-wide association studies, tens of thousands of tests are performed simultaneously to find if any…

统计方法学 · 统计学 2011-11-16 Jianqing Fan , Xu Han , Weijie Gu

This paper introduces an innovative method for conducting conditional independence testing in high-dimensional data, facilitating the automated discovery of significant associations within distinct subgroups of a population, all while…

统计方法学 · 统计学 2023-09-19 Matteo Sesia , Tianshu Sun

The family-wise error rate (FWER) has been widely used in genome-wide association studies. With the increasing availability of functional genomics data, it is possible to increase the detection power by leveraging these genomic functional…

统计方法学 · 统计学 2020-12-25 Huijuan Zhou , Xianyang Zhang , Jun Chen

The false discovery rate (FDR)---the expected fraction of spurious discoveries among all the discoveries---provides a popular statistical assessment of the reproducibility of scientific studies in various disciplines. In this work, we…

机器学习 · 统计学 2015-11-10 Weijie Su , Junyang Qian , Linxi Liu

Multiple hypothesis testing is a fundamental problem in high dimensional inference, with wide applications in many scientific fields. In genome-wide association studies, tens of thousands of tests are performed simultaneously to find if any…

统计方法学 · 统计学 2010-12-21 Xu Han , Weijie Gu , Jianqing Fan

Controlling the false discovery rate (FDR) in high-dimensional variable selection requires balancing rigorous error control with statistical power. Existing methods with provable guarantees are often overly conservative, creating a…

统计方法学 · 统计学 2026-02-06 Arnau Vilella , Jasin Machkour , Michael Muma , Daniel P. Palomar

In genome-wide association studies, hundreds of thousands of genetic features (genes, proteins, etc.) in a given case-control population are tested to verify existence of an association between each genetic marker and a specific disease. A…

应用统计 · 统计学 2021-02-01 Ali Karimnezhad

Model-free knockoffs is a recently proposed technique for identifying covariates that is likely to have an effect on a response variable. The method is an efficient method to control the false discovery rate in hypothesis tests for separate…

统计方法学 · 统计学 2019-03-29 Lars Holden , Kristoffer Hellton

One challenge in exploratory association studies using observational data is that the associations between the predictors and the outcome are potentially weak and rare, and the candidate predictors have complex correlation structures. False…

统计方法学 · 统计学 2025-01-30 Runqiu Wang , Ran Dai , Hongying Dai , Evan French , Cheng Zheng

Controlling False Discovery Rate (FDR) while leveraging the side information of multiple hypothesis testing is an emerging research topic in modern data science. Existing methods rely on the test-level covariates while ignoring metrics…

机器学习 · 统计学 2022-10-10 Lin Qiu , Nils Murrugarra-Llerena , Vítor Silva , Lin Lin , Vernon M. Chinchilli

Differences between biological networks corresponding to disease conditions can help delineate the underlying disease mechanisms. Existing methods for differential network analysis do not account for dependence of networks on covariates. As…

统计方法学 · 统计学 2021-05-18 Aaron Hudson , Ali Shojaie

This paper develops a framework for testing for associations in a possibly high-dimensional linear model where the number of features/variables may far exceed the number of observational units. In this framework, the observations are split…

统计方法学 · 统计学 2018-05-04 Rina Foygel Barber , Emmanuel J. Candes
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