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In this paper, we inspect well-known population genetics and social dynamics models. In these models, interacting individuals, while participating in a self-organizing process, give rise to the emergence of complex behaviors and patterns.…

种群与进化 · 定量生物学 2012-07-11 Sven Banisch , Tanya Araújo

While evolution has inspired algorithmic methods of heuristic optimisation, little has been done in the way of using concepts of computation to advance our understanding of salient aspects of biological phenomena. We argue that under…

计算复杂性 · 计算机科学 2012-06-05 Hector Zenil , James A. R. Marshall

We study the evolution of recombination using a microscopic model developed within the frame of the theory of quantitative traits. Two components of fitness are considered: a static one that describes adaptation to environmental factors not…

种群与进化 · 定量生物学 2007-05-23 Franco Bagnoli , Carlo Guardiani

One essential ingredient of evolutionary theory is the concept of fitness as a measure for a species' success in its living conditions. Here, we quantify the effect of environmental fluctuations onto fitness by analytical calculations on a…

种群与进化 · 定量生物学 2015-05-19 Anna Melbinger , Massimo Vergassola

In this article, a stochastic individual-based model describing Darwinian evolution of asexual, phenotypic trait-structured population, is studied. We consider a large population with constant population size characterised by a resampling…

概率论 · 数学 2024-07-09 Nicolas Champagnat , Vincent Hass

Microbes providing public goods are widespread in nature despite running the risk of being exploited by free-riders. However, the precise ecological factors supporting cooperation are still puzzling. Following recent experiments, we…

种群与进化 · 定量生物学 2012-03-28 Jonas Cremer , Anna Melbinger , Erwin Frey

We explore how physical scale and population size shape the emergence of complex behaviors in open-ended ecological environments. In our setting, agents are unsupervised and have no explicit rewards or learning objectives but instead evolve…

Evolutionary dynamics can be studied in well-mixed or structured populations. Population structure typically arises from the heterogeneous distribution of individuals in physical space or on social networks. Here we introduce a new type of…

种群与进化 · 定量生物学 2009-06-04 Tibor Antal , Hisashi Ohtsuki , John Wakeley , Peter D. Taylor , Martin A. Nowak

We investigate the evolutionary rescue of a microbial population in a gradually deteriorating environment, through a combination of analytical calculations and stochastic simulations. We consider a population destined for extinction in the…

种群与进化 · 定量生物学 2020-12-17 Loïc Marrec , Anne-Florence Bitbol

Whether or not biodiversity dynamics tend toward stable equilibria remains an unsolved question in ecology and evolution with important implications for our understanding of diversity and its conservation. Phylo/population genetic models…

种群与进化 · 定量生物学 2017-05-16 A. J. Rominger , I. Overcast , H. Krehenwinkel , R. G. Gillespie , J. Harte , M. J. Hickerson

Understanding the influence of an environment on the evolution of its resident population is a major challenge in evolutionary biology. Great progress has been made in homogeneous population structures while heterogeneous structures have…

种群与进化 · 定量生物学 2014-07-30 Wes Maciejewski , Gregory J. Puleo

While it is relatively easy to imitate and evolve natural swarm behavior in simulations, less is known about the social characteristics of simulated, evolved swarms, such as the optimal (evolutionary) group size, why individuals in a swarm…

神经与进化计算 · 计算机科学 2018-04-25 Dominik Fischer , Sanaz Mostaghim , Larissa Albantakis

Biological systems reach organizational complexity that far exceeds the complexity of any known inanimate objects. Biological entities undoubtedly obey the laws of quantum physics and statistical mechanics. However, is modern physics…

其他定量生物学 · 定量生物学 2018-02-26 Mikhail I. Katsnelson , Yuri I. Wolf , Eugene V. Koonin

Bedau has developed a general set of evolutionary statistics that quantify the adaptive component of evolutionary processes. On the basis of these measures, he has proposed a set of 4 classes of evolutionary system. All artificial life…

适应与自组织系统 · 物理学 2009-09-29 Russell K. Standish

Evolutionary biology shares many concepts with statistical physics: both deal with populations, whether of molecules or organisms, and both seek to simplify evolution in very many dimensions. Often, methodologies have undergone parallel and…

种群与进化 · 定量生物学 2015-03-19 Harold P. de Vladar , Nick H. Barton

We study the evolution of artificial learning systems by means of selection. Genetic programming is used to generate a sequence of populations of algorithms which can be used by neural networks for supervised learning of a rule that…

生物物理 · 物理学 2009-11-07 Juan Pablo Neirotti , Nestor Caticha

We review models of biological evolution in which the population frequency changes deterministically with time. If the population is self-replicating, although the equations for simple prototypes can be linearised, nonlinear equations arise…

种群与进化 · 定量生物学 2015-05-27 Kavita Jain , Sarada Seetharaman

Computer modelling for evolutionary systems consists in: 1) to store in the memory the individual features of each member of a large population; and 2) to update the whole system repeatedly, as time goes by, according to some prescribed…

统计力学 · 物理学 2007-05-23 Paulo Murilo Castro de Oliveira

We present a model for evolving population which maintains genetic polymorphism. By introducing random mutation in the model population at a constant rate, we observe that the population does not become extinct but survives, keeping…

软凝聚态物质 · 物理学 2009-10-31 H. Y. Lee , D. Kim , M. Y. Choi

Evolutionary game theory has proven to be an elegant framework providing many fruitful insights in population dynamics and human behaviour. Here, we focus on the aspect of behavioural plasticity and its effect on the evolution of…

种群与进化 · 定量生物学 2020-09-29 M. Kleshnina , K. Kaveh , K. Chatterjee