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Motivation: Mendelian randomization (MR) infers causal relationships between exposures and outcomes using genetic variants as instrumental variables. Typically, MR considers only a pair of exposure and outcome at a time, limiting its…

应用统计 · 统计学 2025-10-14 Bitan Sarkar , Yang Ni

In molecular biology, advances in high-throughput technologies have made it possible to study complex multivariate phenotypes and their simultaneous associations with high-dimensional genomic and other omics data, a problem that can be…

统计方法学 · 统计学 2021-12-02 Zhi Zhao , Marco Banterle , Leonardo Bottolo , Sylvia Richardson , Alex Lewin , Manuela Zucknick

Mendelian randomization (MR) is a statistical method exploiting genetic variants as instrumental variables to estimate the causal effect of modifiable risk factors on an outcome of interest. Despite wide uses of various popular two-sample…

统计方法学 · 统计学 2021-11-17 Anqi Wang , Zhonghua Liu

Probability density estimation is a central task in statistics. Copula-based models provide a great deal of flexibility in modelling multivariate distributions, allowing for the specifications of models for the marginal distributions…

统计方法学 · 统计学 2024-05-08 Nicolás Kuschinski , Richard Warr , Alejandro Jara

Measurement error and missing data in variables used in statistical models are common, and can at worst lead to serious biases in analyses if they are ignored. Yet, these problems are often not dealt with adequately, presumably in part…

统计方法学 · 统计学 2024-06-13 Emma Skarstein , Stefanie Muff

We discuss a bivariate beta distribution that can model arbitrary beta-distributed marginals with a positive correlation. The distribution is constructed from six independent gamma-distributed random variates. We show how the parameters of…

统计理论 · 数学 2021-06-03 Susanne Trick , Frank Jäkel , Constantin A. Rothkopf

For many cancer sites low-dose risks are not known and must be extrapolated from those observed in groups exposed at much higher levels of dose. Measurement error can substantially alter the dose-response shape and hence the extrapolated…

定量方法 · 定量生物学 2024-03-15 Mark P Little , Nobuyuki Hamada , Lydia B Zablotska

Precision medicine aims to optimize treatment by identifying patient subgroups most likely to benefit from specific interventions. To support this goal, we introduce fkbma, an R package that implements a Bayesian model averaging approach…

统计方法学 · 统计学 2025-03-18 Lara Maleyeff , Shirin Golchi , Erica E. M. Moodie

Atomic-level simulations are widely used to study biomolecules and their dynamics. A common goal in such studies is to compare simulations of a molecular system under several conditions -- for example, with various mutations or bound…

生物大分子 · 定量生物学 2025-01-07 Martin Vögele , Neil J. Thomson , Sang T. Truong , Jasper McAvity , Ulrich Zachariae , Ron O. Dror

BRBVS is a publicly available \texttt{R} package on CRAN that implements the algorithm proposed in Petti et al.(2024a). The algorithm was developed as the first proposal of variable selection for the class of Bivariate Survival Copula…

统计方法学 · 统计学 2025-01-23 Danilo Petti , Marcella Niglio , Marialuisa Restaino

Accurate prediction and identification of variables associated with outcomes or disease states are critical for advancing diagnosis, prognosis, and precision medicine in biomedical research. Regularized regression techniques, such as lasso,…

应用统计 · 统计学 2025-04-14 Xiaoru Dong , Apoorva Goyal , Muxuan Liang , Maigan A. Brusko , Todd M. Brusko , Rhonda Bacher

We propose a new ensemble prediction method, Random Subset Averaging (RSA), tailored for settings with many covariates, particularly in the presence of strong correlations. RSA constructs candidate models via binomial random subset strategy…

统计方法学 · 统计学 2025-12-30 Wenhao Cui , Jie Hu

Medical prediction applications often need to deal with small sample sizes compared to the number of covariates. Such data pose problems for prediction and variable selection, especially when the covariate-response relationship is…

机器学习 · 统计学 2024-11-05 Jeroen M. Goedhart , Thomas Klausch , Jurriaan Janssen , Mark A. van de Wiel

Biochemical reaction models describing subcellular processes generally come with a large uncertainty. To be able to account for this during the modeling process, we have developed the R-package UQSA, performing uncertainty quantification…

Repeated-measure designs allow comparisons within a group as well as between groups, and are commonly referred to as split-plot designs. While originating in agricultural experiments, they are now widely used in medical research,…

统计计算 · 统计学 2025-12-22 Paavo Sattler , Nils Hichert

We propose a new semi-parametric distributional regression smoother that is based on a copula decomposition of the joint distribution of the vector of response values. The copula is high-dimensional and constructed by inversion of a pseudo…

统计方法学 · 统计学 2020-06-30 Michael Stanley Smith , Nadja Klein

Copula models of multivariate data are popular because they allow separate specification of marginal distributions and the copula function. These components can be treated as inter-related modules in a modified Bayesian inference approach…

统计方法学 · 统计学 2026-04-03 Lucas Kock , David T. Frazier , Michael Stanley Smith , David J. Nott

In this article, we develop fully Bayesian, copula-based, spatial-statistical models for large, noisy, incomplete, and non-Gaussian spatial data. Our approach includes novel constructions of copulas that accommodate a spatial-random-effects…

统计方法学 · 统计学 2025-11-05 Alan Pearse , David Gunawan , Noel Cressie

Doubly Robust (DR) estimation of treatment effect relies on an untestable assumption that is the absence of unobserved confounding. This assumption is par- ticularly problematic in the context of healthcare research, where variables like…

统计方法学 · 统计学 2026-05-07 Sahil Shikalgar , Md. Noor-E-Alam

Structured additive distributional copula regression allows to model the joint distribution of multivariate outcomes by relating all distribution parameters to covariates. Estimation via statistical boosting enables accounting for…