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We propose a method to create document representations that reflect their internal structure. We modify Tree-LSTMs to hierarchically merge basic elements such as words and sentences into blocks of increasing complexity. Our Structure…

计算与语言 · 计算机科学 2019-10-08 Khalil Mrini , Claudiu Musat , Michael Baeriswyl , Martin Jaggi

DNA sequences encode critical genetic information, yet their variable length and discrete nature impede direct utilization in deep learning models. Existing DNA representation schemes convert sequences into numerical vectors but fail to…

基因组学 · 定量生物学 2025-12-16 Zhiyuan Peng , Naifan Zhang , Yuanbo Tang , Yang Li

The robustness of recent Large Language Models (LLMs) has become increasingly crucial as their applicability expands across various domains and real-world applications. Retrieval-Augmented Generation (RAG) is a promising solution for…

计算与语言 · 计算机科学 2024-10-23 Sukmin Cho , Soyeong Jeong , Jeongyeon Seo , Taeho Hwang , Jong C. Park

Hierarchical text classification, which aims to classify text documents into a given hierarchy, is an important task in many real-world applications. Recently, deep neural models are gaining increasing popularity for text classification due…

计算与语言 · 计算机科学 2019-01-01 Yu Meng , Jiaming Shen , Chao Zhang , Jiawei Han

Scientific document summarization has been a challenging task due to the long structure of the input text. The long input hinders the simultaneous effective modeling of both global high-order relations between sentences and local…

计算与语言 · 计算机科学 2024-05-17 Chenlong Zhao , Xiwen Zhou , Xiaopeng Xie , Yong Zhang

This paper introduces the L-ReLF (Low-Resource Lexical Framework), a novel, reproducible methodology for creating high-quality, structured lexical datasets for underserved languages. The lack of standardized terminology, exemplified by…

计算与语言 · 计算机科学 2026-04-01 Anass Sedrati , Mounir Afifi , Reda Benkhadra

Recent years have witnessed the success of dictionary learning (DL) based approaches in the domain of pattern classification. In this paper, we present an efficient structured dictionary learning (ESDL) method which takes both the diversity…

计算机视觉与模式识别 · 计算机科学 2020-07-15 Zi-Qi Li , Jun Sun , Xiao-Jun Wu , He-Feng Yin

Research on text simplification has primarily focused on lexical and sentence-level changes. Long document-level simplification (DS) is still relatively unexplored. Large Language Models (LLMs), like ChatGPT, have excelled in many natural…

计算与语言 · 计算机科学 2025-01-08 Dengzhao Fang , Jipeng Qiang , Yi Zhu , Yunhao Yuan , Wei Li , Yan Liu

The minimal sets within a collection of sets are defined as the ones which do not have a proper subset within the collection, and the maximal sets are the ones which do not have a proper superset within the collection. Identifying extremal…

数据结构与算法 · 计算机科学 2015-08-10 Martin Marinov , Nicholas Nash , David Gregg

Compressed indexing is a powerful technique that enables efficient querying over data stored in compressed form, significantly reducing memory usage and often accelerating computation. While extensive progress has been made for…

数据结构与算法 · 计算机科学 2025-10-23 Rajat De , Dominik Kempa

The development of deep neural networks has improved representation learning in various domains, including textual, graph structural, and relational triple representations. This development opened the door to new relation extraction beyond…

计算与语言 · 计算机科学 2022-12-22 Masaki Asada

Long text classification is challenging for Large Language Models (LLMs) due to token limits and high computational costs. This study explores whether a Retrieval Augmented Generation (RAG) approach using only the most relevant text…

String data are often disseminated to support applications such as location-based service provision or DNA sequence analysis. This dissemination, however, may expose sensitive patterns that model confidential knowledge. In this paper, we…

Supervised learning problems with side information in the form of a network arise frequently in applications in genomics, proteomics and neuroscience. For example, in genetic applications, the network side information can accurately capture…

统计理论 · 数学 2024-10-24 Sagnik Nandy , Subhabrata Sen

Mappings to structured output spaces (strings, trees, partitions, etc.) are typically learned using extensions of classification algorithms to simple graphical structures (eg., linear chains) in which search and parameter estimation can be…

机器学习 · 计算机科学 2009-07-07 Hal Daumé , Daniel Marcu

Successful machine learning methods require a trade-off between memorization and generalization. Too much memorization and the model cannot generalize to unobserved examples. Too much over-generalization and we risk under-fitting the data.…

人工智能 · 计算机科学 2023-03-09 Chase Yakaboski , Eugene Santos

In this paper, we present a toolbox for a specific optimization problem that frequently arises in bioinformatics or genomics. In this specific optimisation problem, the state space is a set of words of specified length over a finite…

人工智能 · 计算机科学 2017-06-27 Régis Garnier , Christophe Guyeux , Stéphane Chrétien

Graph-structured data is central to many scientific and industrial domains, where the goal is often to optimize objectives defined over graph structures. Given the combinatorial complexity of graph spaces, such optimization problems are…

最优化与控制 · 数学 2025-09-25 Shiqiang Zhang , Ruth Misener

Text-rich graphs, prevalent in data mining contexts like e-commerce and academic graphs, consist of nodes with textual features linked by various relations. Traditional graph machine learning models, such as Graph Neural Networks (GNNs),…

社会与信息网络 · 计算机科学 2024-06-19 Shichang Zhang , Da Zheng , Jiani Zhang , Qi Zhu , Xiang song , Soji Adeshina , Christos Faloutsos , George Karypis , Yizhou Sun

Retrieval-Augmented Generation (RAG) plays a crucial role in grounding Large Language Models by leveraging external knowledge, whereas the effectiveness is often compromised by the retrieval of contextually flawed or incomplete information.…

人工智能 · 计算机科学 2025-11-13 Yaoze Zhang , Rong Wu , Pinlong Cai , Xiaoman Wang , Guohang Yan , Song Mao , Ding Wang , Botian Shi