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In the last years, a remarkable theoretical effort has been made in order to understand stability and complexity in ecological communities. The non-random structures of real ecological interaction networks has been recognized as one key…

种群与进化 · 定量生物学 2013-01-09 Samir Suweis , Jacopo Grilli , Amos Maritan

We use computer simulation to study crystal-forming model proteins equipped with interactions that are both orientationally specific and nonspecific. Distinct dynamical pathways of crystal formation can be selected by tuning the strengths…

软凝聚态物质 · 物理学 2012-04-16 Stephen Whitelam

We study a process of pattern formation for a generic model of species anchored to the nodes of a network where local reactions take place, and that experience non-reciprocal long-range interactions, encoded by the network directed links.…

斑图形成与孤子 · 物理学 2025-10-22 Timoteo Carletti , Riccardo Muolo

Complex systems with global interactions tend to be stable if interactions between components are sufficiently homogeneous. In biological systems, which often have small copy numbers and interactions mediated by diffusing agents, noise and…

生物物理 · 物理学 2023-04-14 Fabrizio Olmeda , Steffen Rulands

We consider a model for population dynamics such as for the evolution of bacterial colonies which is of the Fisher type but where the competitive interaction among individuals is non-local, and show that spatial structures with interesting…

斑图形成与孤子 · 物理学 2016-09-08 M. A. Fuentes , M. N. Kuperman , V. M. Kenkre

A hallmark of living systems is the ability to employ a common set of versatile building blocks that can self-organize into a multitude of different structures, in a way that can be controlled with minimal cost. This capability can only be…

统计力学 · 物理学 2022-01-26 Saeed Osat , Ramin Golestanian

A central feature of complex systems is the relevance and entanglement of different levels of description. For instance, the dynamics of ecosystems can be alternatively described in terms of large ecological processes and classes of…

种群与进化 · 定量生物学 2025-10-06 Juan Giral Martínez , Silvia de Monte , Matthieu Barbier

In equilibrium systems with short-ranged interactions, the relative stability of different thermodynamic states generally does not depend on system size (as long as this size is larger than the interaction range). Here, we use a large…

统计力学 · 物理学 2013-05-30 Sorin Tanase-Nicola , David K. Lubensky

Understanding the stability of complex communities is a central focus in ecology, many important theoretical advancements have been made to identify drivers of ecological stability. However, previous results often rely on the…

种群与进化 · 定量生物学 2025-04-04 Shuaiying Wang , Yuguang Yang , Aming Li

Random non-reciprocal interactions between a large number of conserved densities are shown to enhance the stability of the system towards pattern formation. The enhanced stability is an exact result when the number of species approaches…

软凝聚态物质 · 物理学 2025-10-08 Laya Parkavousi , Navdeep Rana , Ramin Golestanian , Suropriya Saha

A simple model for the formation of a complex organism is introduced. Individuals can communicate and specialize, leading to an increase in productivity. If there are limits to the capacity of individuals to communicate with other…

adap-org · 物理学 2009-10-30 Barbara Drossel

We consider a couple of models for the dynamics of the populations of two interacting species, inspired by Lotka-Volterra's classical equations. The novelty of this work is that the interaction terms are non local and the interaction occurs…

种群与进化 · 定量生物学 2022-09-21 Mario I. Simoy , Marcelo N. Kuperman

Systems of identical particles possessing non-local interactions are capable of exhibiting extra-classical properties beyond the characteristic quantum length scales. This letter derives the dynamics of such systems in the non-relativistic…

宇宙学与河外天体物理 · 物理学 2020-03-24 Erik W Lentz , Thomas R Quinn , Leslie J Rosenberg

In complex systems, the interplay between nonlinear and stochastic dynamics, e.g., J. Monod's necessity and chance, gives rise to an evolutionary process in Darwinian sense, in terms of discrete jumps among attractors, with punctuated…

适应与自组织系统 · 物理学 2013-03-18 Hong Qian

Randomly-assembled dynamical systems are theoretically predicted to be unstable upon crossing a critical threshold of complexity, as first shown by May. Yet, empirical complex systems exhibit remarkable stability, indicating the presence of…

无序系统与神经网络 · 物理学 2026-03-31 Francesco Ferraro , Christian Grilletta , Amos Maritan , Samir Suweis , Sandro Azaele

In this paper we examine the stability of scalar perturbations in nonsingular models which emerge from an interacting vacuum component. The analysis developed in this paper relies on two phenomenological choices for the energy exchange…

广义相对论与量子宇宙学 · 物理学 2024-05-24 Filipe Cattete Alves , Rodrigo Maier

Ecosystems are formed by networks of species and their interactions. Traditional models of such interactions assume a constant interaction strength between a given pair of species. However, there is often significant trait variation among…

种群与进化 · 定量生物学 2022-05-03 Zachary Jackson , BingKan Xue

Behavioural differences may arise in the absence of genetic or environmental variation. Chaotic dynamics may influence behavioural development, and so this among-individual variation. We discuss methods and experimental designs to test this…

种群与进化 · 定量生物学 2018-03-23 David N Fisher , Matthew Brachmann , Joseph B Burant

The population dynamics and stability of ecosystems of interacting species is studied from the perspective of non-equilibrium thermodynamics by assuming that species, through their biotic and abiotic interactions, are units of entropy…

生物物理 · 物理学 2007-05-23 Karo Michaelian

The capacity of proteins to interact specifically with one another underlies our conceptual understanding of how living systems function. Systems-level study of specificity in protein-protein interactions is complicated by the fact that the…

生物大分子 · 定量生物学 2009-11-13 Eric Deeds , orr Ashenberg , Jaline Gerardine , Eugene Shakhnovich
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