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Missing data is a recurrent issue in epidemiology where the infection process may be partially observed. Approximate Bayesian Computation, an alternative to data imputation methods such as Markov Chain Monte Carlo integration, is proposed…

应用统计 · 统计学 2010-08-31 Michael G. B. Blum , Viet Chi Tran

Datasets containing large samples of time-to-event data arising from several small heterogeneous groups are commonly encountered in statistics. This presents problems as they cannot be pooled directly due to their heterogeneity or analyzed…

机器学习 · 统计学 2016-12-05 Alexandre Piché , Russell Steele , Ian Shrier , Stephanie Long

The Linear Threshold Model is a widely used model that describes how information diffuses through a social network. According to this model, an individual adopts an idea or product after the proportion of their neighbors who have adopted it…

社会与信息网络 · 计算机科学 2022-01-28 Christopher Tran , Elena Zheleva

Tuberculosis (TB) is a major global health challenge, and is compounded by co-morbidities such as HIV, diabetes, and anemia, which complicate treatment outcomes and contribute to heterogeneous patient responses. Traditional models of TB…

机器学习 · 计算机科学 2024-11-19 Ethan Wu , Caleb Ellington , Ben Lengerich , Eric P. Xing

Stochastic epidemic models describe the dynamics of an epidemic as a disease spreads through a population. Typically, only a fraction of cases are observed at a set of discrete times. The absence of complete information about the time…

统计计算 · 统计学 2017-02-14 Jonathan Fintzi , Xiang Cui , Jon Wakefield , Vladimir N. Minin

We present a thorough inspection of the dynamical behavior of epidemic phenomena in populations with complex and heterogeneous connectivity patterns. We show that the growth of the epidemic prevalence is virtually instantaneous in all…

无序系统与神经网络 · 物理学 2007-05-23 Marc Barthelemy , Alain Barrat , Romualdo Pastor-Satorras , Alessandro Vespignani

Health management is getting increasing attention all over the world. However, existing health management mainly relies on hospital examination and treatment, which are complicated and untimely. The emerging of mobile devices provides the…

机器学习 · 计算机科学 2021-03-24 Xuan Ma , Xiaoshan Yang , Junyu Gao , Changsheng Xu

This paper investigates the impact of human activity and mobility (HAM) in the spreading dynamics of an epidemic. Specifically, it explores the interconnections between HAM and its effect on the early spread of the COVID-19 virus. During…

物理与社会 · 物理学 2021-08-06 Shakib Mustavee , Shaurya Agarwal , Chinwendu Enyioha , Suddhasattwa Das

Electronic health records (EHRs) are increasingly used for clinical and comparative effectiveness research, but suffer from missing data. Motivated by health services research on diabetes care, we seek to increase the quality of EHRs by…

统计方法学 · 统计学 2020-07-14 Yajuan Si , Mari Palta , Maureen Smith

Progressive diseases worsen over time and are characterised by monotonic change in features that track disease progression. Here we connect ideas from two formerly separate methodologies -- event-based and hidden Markov modelling -- to…

机器学习 · 计算机科学 2021-06-07 Peter A. Wijeratne , Daniel C. Alexander

Latent feature modeling allows capturing the latent structure responsible for generating the observed properties of a set of objects. It is often used to make predictions either for new values of interest or missing information in the…

机器学习 · 统计学 2018-03-09 Isabel Valera , Melanie F. Pradier , Maria Lomeli , Zoubin Ghahramani

Epidemic disease spreading is conventionally often modelled and analyzed by means of rate and diffusion equations, following the paradigms of well-controlled chemical reactions and diffusive dynamics in a test tube. Yet, serious worries…

物理与社会 · 物理学 2023-01-03 Klaus Kroy

Hidden Markov Models (HMMs) are powerful tools for modeling sequential data, where the underlying states evolve in a stochastic manner and are only indirectly observable. Traditional HMM approaches are well-established for linear sequences,…

机器学习 · 统计学 2024-06-05 Farzan Vafa , Sahand Hormoz

In many epidemiological models a nonlinear transmission function is used in the form of power law relationship. It is constantly argued that such form reflects population heterogeneities including differences in the mixing pattern,…

种群与进化 · 定量生物学 2008-09-10 Artem S. Novozhilov

Analysis of multivariate healthcare time series data is inherently challenging: irregular sampling, noisy and missing values, and heterogeneous patient groups with different dynamics violating exchangeability. In addition, interpretability…

机器学习 · 计算机科学 2023-11-15 Onur Poyraz , Pekka Marttinen

Our work stems from the consideration that the spreading of a disease is modulated by the individual's perception of the infected neighborhood and his/her strategy to avoid being infected as well. We introduced a general ``cellular agent''…

种群与进化 · 定量生物学 2008-01-20 Luca Sguanci , Pietro Lio' , Franco Bagnoli

We consider Bayesian estimation of a hierarchical linear model (HLM) from partially observed data, assumed to be missing at random, and small sample sizes. A vector of continuous covariates $C$ includes cluster-level partially observed…

统计方法学 · 统计学 2025-02-03 Dongho Shin , Yongyun Shin , Nao Hagiwara

Revealing relationships between genes and disease phenotypes is a critical problem in biomedical studies. This problem has been challenged by the heterogeneity of diseases. Patients of a perceived same disease may form multiple subgroups,…

统计方法学 · 统计学 2022-11-30 Yifan Sun , Ziye Luo , Xinyan Fan

In this article, we propose a network spread model for HIV epidemics, wherein each individual is represented by a node of the transmission network and the edges are the connections between individuals along which the infection may spread.…

生物物理 · 物理学 2007-08-29 Wen-Jie Bai , Tao Zhou , Bing-Hong Wang

Heterogeneous networks play a key role in the evolution of communities and the decisions individuals make. These networks link different types of entities, for example, people and the events they attend. Network analysis algorithms usually…

计算机与社会 · 计算机科学 2016-11-17 Rumi Ghosh , Kristina Lerman
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