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Solvent plays an important role in the relative motion of nanoscopic bodies, and the study of such phenomena can help elucidate the mechanism of hydrophobic assembly, as well as the influence of solvent-mediated effects on in vivo motion in…

统计力学 · 物理学 2011-12-12 Joseph A. Morrone , Jingyuan Li , B. J. Berne

Particles that are immersed in a fluid exchange momentum via the fluid, hence their Brownian motion is correlated. By means of multiparticle-collision dynamics simulations we study the interactions between two colloidal beads in a sheared…

软凝聚态物质 · 物理学 2012-03-16 Marc Radu , Tanja Schilling

Minimal models of active Brownian colloids consisting of self-propelled spherical particles with purely repulsive interactions have recently been identified as excellent quantitative testing grounds for theories of active matter and have…

软凝聚态物质 · 物理学 2016-04-12 M. Cristina Marchetti , Yaouen Fily , Silke Henkes , Adam Patch , David Yllanes

Over the past decade, autophoretic colloids have emerged as a prototypical system for studying self-propelled motion at microscopic scales, with promising applications in microfluidics, micromachinery, and therapeutics. Their motion in a…

软凝聚态物质 · 物理学 2026-05-19 Ursy Makanga , Akhil Varma , Panayiota Katsamba

Biological organisms swimming at low Reynolds number are often influenced by the presence of rigid boundaries and soft interfaces. In this paper we present an analysis of locomotion near a free surface with surface tension. Using a…

流体动力学 · 物理学 2015-03-13 Darren Crowdy , Sungyon Lee , Ophir Samson , Eric Lauga , A. E. Hosoi

Brownian motion occurs in a variety of fluids, from rare gases to liquids. The Langevin equation, describing friction and agitation forces in statistical balance, is one of the most successful ways to treat the phenomenon. In rare gases, it…

统计力学 · 物理学 2020-06-15 Frank Munley

The traction on the surface of a spherical active colloid in a thermally fluctuating Stokesian fluid contains passive, active, and Brownian contributions. Here we derive these three parts systematically, by "projecting out" the fluid using…

软凝聚态物质 · 物理学 2017-09-11 Rajesh Singh , R. Adhikari

We consider a model of active Brownian particles with velocity-alignment in two spatial dimensions with passive and active fluctuations. Hereby, active fluctuations refers to purely non-equilibrium stochastic forces correlated with the…

统计力学 · 物理学 2016-05-02 Robert Grossmann , Lutz Schimansky-Geier , Pawel Romanczuk

We describe in detail how to implement a coarse-grained hybrid Molecular Dynamics and Stochastic Rotation Dynamics simulation technique that captures the combined effects of Brownian and hydrodynamic forces in colloidal suspensions. The…

软凝聚态物质 · 物理学 2007-05-23 J. T. Padding , A. A. Louis

The dynamics of a tracer molecule near a fluid membrane is investigated, with particular emphasis given to the interplay between the instantaneous position of the particle and membrane fluctuations. It is found that hydrodynamic…

软凝聚态物质 · 物理学 2009-11-11 Thomas Bickel

The paper presents a two-phase hydrodynamic model for the numerical simulation of collective motion in a thin layer of active colloids containing spherical microswimmers. The model accounts for three fundamental mechanisms governing the…

软凝聚态物质 · 物理学 2025-12-10 A. Kiverin , S. Luguev , I. Yakovenko

Elastic filaments are vital to biological, physical and engineering systems, from cilia driving fluid in the lungs to artificial swimmers and micro-robotics. Simulating slender structures requires intricate balance of elastic, body, active,…

生物物理 · 物理学 2023-06-02 Paul Fuchter , Hermes Bloomfield-Gadêlha

Simulations of macromolecular diffusion and adsorption in confined environments can offer valuable mechanistic insights into numerous biophysical processes. In order to model solutes at atomic detail on relevant time scales, Brownian…

软凝聚态物质 · 物理学 2021-03-16 Martin Reinhardt , Neil J. Bruce , Daria B. Kokh , Rebecca C. Wade

We introduce numerical methods for simulating the diffusive motion of rigid bodies of arbitrary shape immersed in a viscous fluid. We parameterize the orientation of the bodies using normalized quaternions, which are numerically robust,…

软凝聚态物质 · 物理学 2015-10-28 Steven Delong , Florencio Balboa Usabiaga , Aleksandar Donev

While the dynamics of polymer chains in equilibrium media is well understood by now, the polymer dynamics in active non-equilibrium environments can be very different. Here we study the dynamics of polymers in a viscous medium containing…

软凝聚态物质 · 物理学 2017-06-23 Jaeoh Shin , Andrey G. Cherstvy , Won Kyu Kim , Vasily Zaburdaev

Although the dynamics of colloids in the vicinity of a solid interface has been widely characterized in the past, experimental studies of Brownian diffusion close to an air-water interface are rare and limited to particle-interface gap…

软凝聚态物质 · 物理学 2022-11-11 Stefano Villa , Christophe Blanc , Abdallah Daddi-Moussa-Ider , Antonio Stocco , Maurizio Nobili

Brownian motion is essential for describing diffusion in systems ranging from simple to complex liquids. Unlike simple liquids, which consist of only a solvent, complex liquids, such as colloidal suspensions or the cytoplasm of a cell, are…

软凝聚态物质 · 物理学 2025-02-27 Jeffrey C. Everts , Robert Hołyst , Karol Makuch

Theory and simulation of Brownian colloids suspended in an implicit solvent, with the hydrodynamics of the fluid accounted for by effective interactions between the colloids, are shown to yield a marked and hitherto unobserved discrepancy…

软凝聚态物质 · 物理学 2020-03-18 Duraivelan Palanisamy , Wouter K. den Otter

In this fluid dynamics video we explore an array of different possible dynamics for a flexible filament sedimenting in a viscous fluid. The time-dependent shapes and trajectories of the filament are determined analytically and numerically…

流体动力学 · 物理学 2013-10-03 Harishankar Manikantan , Lei Li , David Saintillan , Saverio E. Spagnolie

Time-lapse microscopy imaging provides direct access to the dynamics of soft and living systems. At mesoscopic scales, such microscopy experiments reveal intrinsic fluctuations, which may have both thermal and non-equilibrium origins. These…

生物物理 · 物理学 2020-12-02 F. S. Gnesotto , G. Gradziuk , P. Ronceray , C. P. Broedersz