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We consider a class of biologically-motivated stochastic processes in which a unicellular organism divides its resources (volume or damaged proteins, in particular) symmetrically or asymmetrically between its progeny. Assuming the final…

定量方法 · 定量生物学 2016-07-20 Andrew Marantan , Ariel Amir

The segregation of plasmids in a bacterial population is investigated. Hereby, a dynamical model is formulated in terms of a size-structured population using a hyperbolic partial differential equation incorporating non-local terms (the…

种群与进化 · 定量生物学 2017-01-13 Johannes Müller , Karin Münch , Bendix Koopmann , Eva Stadler , Louisa Roselius , Dieter Jahn , Richard Münch

During Saccharomyces cerevisiae closed mitosis, parental identity is sustained by the asymmetric segregation of ageing factors. Such asymmetry has been hypothesized to occur via diffusion barriers, constraining protein lateral exchange in…

亚细胞过程 · 定量生物学 2014-07-29 Eder Zavala , Tatiana T. Marquez-Lago

Plasmids are major players in Horizontal Gene Transfer mechanisms, hence they are highly variable in their gene content and length. We propose a model for the fitness of a plasmid as a function of its length, which predicts diminishing…

种群与进化 · 定量生物学 2014-11-04 Alice Ledda , Luca Ferretti

In order to fulfill cell proliferation and differentiation through cellular hierarchy, stem cells can undergo either asymmetric or symmetric divisions. Recent studies pay special attention to the effect of different modes of stem cell…

种群与进化 · 定量生物学 2020-10-08 Zhijie Wu , Yuman Wang , Kun Wang , Da Zhou

Past work has shown that ions can pass through a membrane more readily in one direction than the other. We demonstrate here in a model and an experiment that for a mixture of small and large particles such asymmetric diffusion can arise…

软凝聚态物质 · 物理学 2009-11-13 Robert S. Shaw , Norman Packard , Matthias Schröter , Harry L. Swinney

Diffusion rates through a membrane can be asymmetric, if the diffusing particles are spatially extended and the pores in the membrane have asymmetric structure. This phenomenon is demonstrated here via a deterministic simulation of a…

统计力学 · 物理学 2007-05-23 Norman Packard , Rob Shaw

Microbiomes are complex systems comprised of many interacting species. Species can survive harsh or changing conditions by rapid adaptation, a process accelerated by the exchange of genetic material between different species through…

种群与进化 · 定量生物学 2025-09-04 Johannes Nauta , Kaitlin A. Schaal , Ying-Jie Wang , James P. J. Hall , Shai Pilosof , Manlio De Domenico

Metapopulation theory for a long time has assumed dispersal to be symmetric, i.e. patches are connected through migrants dispersing bi-directionally without a preferred direction. However, for natural populations symmetry is often broken,…

种群与进化 · 定量生物学 2011-10-07 David Kleinhans , Per R. Jonsson

Cycling tissues such as the intestinal epithelium, germ line, and hair follicles, require a constant flux of differentiated cells. These tissues are maintained by a population of stem cells, which generate differentiated progenies and…

细胞行为 · 定量生物学 2013-05-20 Sahand Hormoz

The evolutionary biology of aging is fundamental to understanding the mechanisms of aging and how to develop anti-aging treatments. Thus far most evolutionary theory concerns the genetics of aging with limited physiological integration.…

种群与进化 · 定量生物学 2025-09-22 Mirre J P Simons , Marc Tatar

Asymmetric segregation of key proteins at cell division -- be it a beneficial or deleterious protein -- is ubiquitous in unicellular organisms and often considered as an evolved trait to increase fitness in a stressed environment. Here, we…

种群与进化 · 定量生物学 2019-02-20 Jie Lin , Jiseon Min , Ariel Amir

Plasmids are autonomously replicating genetic elements in bacteria. At cell division plasmids are distributed among the two daughter cells. This gene transfer from one generation to the next is called vertical gene transfer. We study the…

偏微分方程分析 · 数学 2018-11-20 Eva Stadler

Chemical reactions inside cells are generally considered to happen within fixed-size compartments. Needless to say, cells and their compartments are highly dynamic. Thus, such stringent assumptions may not reflect biochemical reality, and…

定量方法 · 定量生物学 2016-02-17 Atiyo Ghosh , Tatiana T. Marquez-Lago

Asymmetric damage segregation (ADS) is ubiquitous among unicellular organisms: After a mother cell divides, its two daughter cells receive sometimes slightly, sometimes strongly different fractions of damaged proteins accumulated in the…

种群与进化 · 定量生物学 2023-02-17 Arkady Pikovsky , Lev S. Tsimring

The effect of asymmetry in the transbilayer lipid distribution on the dynamics of phase separation in fluid vesicles is investigated numerically for the first time. This asymmetry is shown to set a spontaneous curvature for the domains that…

软凝聚态物质 · 物理学 2009-11-11 Mohamed Laradji , P. B. Sunil Kumar

From the perfect radial symmetries of radiolarian mineral skeletons to the broken symmetry of homochirality, the logic of Nature's regularities has fascinated scientists for centuries. Some of Nature's symmetries are clearly visible in…

Cell size is a fundamental determinant of cellular physiology, influencing processes such as growth, division, and function. In this study, we develop a segmented mathematical framework to investigate how different control mechanisms…

细胞行为 · 定量生物学 2026-02-02 Shuqi Fan , Yuhang Zhang , Jinzhi Lei

Traditionally, it has been held that a central characteristic of stem cells is their ability to divide asymmetrically. Recent advances in inducible genetic labeling provided ample evidence that symmetric stem cell divisions play an…

细胞行为 · 定量生物学 2014-03-05 Leili Shahriyari , Natalia L. Komarova

The stochastic dynamics of colloidal particles with surface activity--in the form of catalytic reaction or particle release--and self-phoretic effects is studied analytically. Three different time scales corresponding to inertial effects,…

软凝聚态物质 · 物理学 2015-05-13 Ramin Golestanian
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