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Markov state models (MSMs)---or discrete-time master equation models---are a powerful way of modeling the structure and function of molecular systems like proteins. Unfortunately, MSMs with sufficiently many states to make a quantitative…

生物大分子 · 定量生物学 2015-06-03 Gregory R. Bowman

This paper considers a joint scattering environment sensing and data recovery problem in an uplink integrated sensing and communication (ISAC) system. To facilitate joint scatterers localization and multi-user (MU) channel estimation, we…

信号处理 · 电气工程与系统科学 2025-02-11 An Liu , Wenkang Xu , Wei Xu , Giuseppe Caire

Tools to analyze the latent space of deep neural networks provide a step towards better understanding them. In this work, we motivate sparse subspace clustering (SSC) with an aim to learn affinity graphs from the latent structure of a given…

机器学习 · 计算机科学 2021-07-06 Uday Singh Saini , Pravallika Devineni , Evangelos E. Papalexakis

We investigate the adaptation and performance of modularity-based algorithms, designed in the scope of complex networks, to analyze the mesoscopic structure of correlation matrices. Using a multi-resolution analysis we are able to describe…

数据分析、统计与概率 · 物理学 2011-03-31 Clara Granell , Sergio Gomez , Alex Arenas

We propose a hierarchical Bayesian recurrent state space model for modeling switching network connectivity in resting state fMRI data. Our model allows us to uncover shared network patterns across disease conditions. We evaluate our method…

机器学习 · 统计学 2020-11-17 Arunesh Mittal , Scott Linderman , John Paisley , Paul Sajda

Semi-structured regression models enable the joint modeling of interpretable structured and complex unstructured feature effects. The structured model part is inspired by statistical models and can be used to infer the input-output…

机器学习 · 计算机科学 2024-01-24 Daniel Dold , David Rügamer , Beate Sick , Oliver Dürr

In this work, we investigate the possibility of improving multireference-driven coupled cluster (CC) approaches with an algorithm that iteratively combines complete active space (CAS) calculations with tailored CC and externally corrected…

化学物理 · 物理学 2025-03-06 Robin Feldmann , Max Mörchen , Jakub Lang , Michał Lesiuk , Markus Reiher

In order to efficiently explore the chemical space of all possible small molecules, a common approach is to compress the dimension of the system to facilitate downstream machine learning tasks. Towards this end, we present a data driven…

生物大分子 · 定量生物学 2024-01-23 Paula Mercurio , Di Liu

Multi-view subspace clustering always performs well in high-dimensional data analysis, but is sensitive to the quality of data representation. To this end, a two stage fusion strategy is proposed to embed representation learning into the…

信号处理 · 电气工程与系统科学 2022-01-07 Run-kun Lu , Jian-wei Liu , Ze-yu Liu , Jin-zhong Chen

We propose a new inference framework, named MOSAIC, for change-point detection in dynamic networks with the simultaneous low-rank and sparse-change structure. We establish the minimax rate of detection boundary, which relies on the sparsity…

机器学习 · 统计学 2025-09-09 Yingying Fan , Jingyuan Liu , Jinchi Lv , Ao Sun

Large knowledge bases typically contain data adhering to various schemas with incomplete and/or noisy type information. This seriously complicates further integration and post-processing efforts, as type information is crucial in correctly…

应用统计 · 统计学 2019-02-19 Artem Lutov , Soheil Roshankish , Mourad Khayati , Philippe Cudré-Mauroux

Inferring cluster structure in microarray datasets is a fundamental task for the -omic sciences. A fundamental question in Statistics, Data Analysis and Classification, is the prediction of the number of clusters in a dataset, usually…

数据结构与算法 · 计算机科学 2011-02-16 Filippo Utro

Data for several applications in diverse fields can be represented as multiple matrices that are linked across rows or columns. This is particularly common in molecular biomedical research, in which multiple molecular "omics" technologies…

机器学习 · 统计学 2024-08-02 Eric F. Lock

The recent development of compressed sensing has led to spectacular advances in the understanding of sparse linear estimation problems as well as in algorithms to solve them. It has also triggered a new wave of developments in the related…

信息论 · 计算机科学 2016-07-05 Christophe Schülke

We connect the problem of semi-supervised clustering to constrained Markov aggregation, i.e., the task of partitioning the state space of a Markov chain. We achieve this connection by considering every data point in the dataset as an…

机器学习 · 计算机科学 2022-05-11 Sophie Steger , Bernhard C. Geiger , Marek Smieja

We study the class of state-space models and perform maximum likelihood estimation for the model parameters. We consider a stochastic approximation expectation-maximization (SAEM) algorithm to maximize the likelihood function with the…

统计计算 · 统计学 2017-10-25 Umberto Picchini , Adeline Samson

Comparative meta-analyses of groups of subjects by integrating multiple observational studies rely on estimated propensity scores (PSs) to mitigate covariate imbalances. However, PS estimation grapples with the theoretical and practical…

统计方法学 · 统计学 2024-05-09 Subharup Guha , Yi Li

Subspace clustering is to find underlying low-dimensional subspaces and cluster the data points correctly. In this paper, we propose a novel multi-view subspace clustering method. Most existing methods suffer from two critical issues.…

人工智能 · 计算机科学 2022-05-24 Mengyuan Zhang , Kai Liu

Given a union of non-linear manifolds, non-linear subspace clustering or manifold clustering aims to cluster data points based on manifold structures and also learn to parameterize each manifold as a linear subspace in a feature space. Deep…

机器学习 · 计算机科学 2022-01-26 Zengyi Li , Yubei Chen , Yann LeCun , Friedrich T. Sommer

In this paper, we present a deep extension of Sparse Subspace Clustering, termed Deep Sparse Subspace Clustering (DSSC). Regularized by the unit sphere distribution assumption for the learned deep features, DSSC can infer a new data…

计算机视觉与模式识别 · 计算机科学 2017-09-26 Xi Peng , Jiashi Feng , Shijie Xiao , Jiwen Lu , Zhang Yi , Shuicheng Yan