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A discrete chemotactic predator-prey model is proposed in which the prey secrets a diffusing chemical which is sensed by the predator and vice versa. Two dynamical states corresponding to catching and escaping are identified and it is shown…

种群与进化 · 定量生物学 2015-05-20 Ankush Sengupta , Tobias Kruppa , Hartmut Löwen

We investigate the boundary between chemotaxis driven by spatial estimation of gradients and chemotaxis driven by temporal estimation. While it is well known that spatial chemotaxis becomes disadvantageous for small organisms at high noise…

神经与进化计算 · 计算机科学 2024-06-18 Albert Alonso , Julius B. Kirkegaard

In this paper we develop a field-theoretic description for run and tumble chemotaxis, based on a density functional description of crystalline materials modified to capture orientational ordering. We show that this framework, with its…

软凝聚态物质 · 物理学 2021-03-10 Purba Chatterjee , Nigel Goldenfeld

Animals use a combination of egocentric navigation driven by the internal integration of environmental cues, interspersed with geocentric course correction and reorientation, often with uncertainty in sensory acquisition of information,…

生物物理 · 物理学 2015-12-22 O. Peleg , L. Mahadevan

In this paper, we conduct a literature review of laws of motion based on stochastic search strategies which are mainly focused on exploring highly dynamic environments. In this regard, stochastic search strategies represent an interesting…

Efficient search acts as a strong selective force in biological systems ranging from cellular populations to predator-prey systems. The search processes commonly involve finding a stationary or mobile target within a heterogeneously…

生物物理 · 物理学 2018-01-03 Youness Azimzade , Alireza Mashaghi

Various microorganisms and some mammalian cells are able to swim in viscous fluids by performing nonreciprocal body deformations, such as rotating attached flagella or by distorting their entire body. In order to perform chemotaxis, i.e. to…

生物物理 · 物理学 2021-05-06 Benedikt Hartl , Maximilian Hübl , Gerhard Kahl , Andreas Zöttl

This review examines intermittent target search strategies, which combine phases of slow motion, allowing the searcher to detect the target, and phases of fast motion during which targets cannot be detected. We first show that intermittent…

统计力学 · 物理学 2015-05-27 O. Bénichou , C. Loverdo , M. Moreau , R. Voituriez

Limbless crawling is ubiquitous in biology, from cells to organisms. We develop and analyze a model for the dynamics of one-dimensional elastic crawlers, subject to active stress and deformation-dependent friction with the substrate. We…

软凝聚态物质 · 物理学 2022-09-14 Sreejith Santhosh , Mattia Serra

This paper investigates a partial-information pursuit evasion game in which the Pursuer has a limited-range sensor to detect the Evader. Given a fixed final time, we derive the optimal evasion strategy for the Evader to maximize its…

计算机科学与博弈论 · 计算机科学 2024-01-24 Dipankar Maity , Alexander Von Moll , Daigo Shishika , Michael Dorothy

Cell migration in vivo is often guided by chemical signals. Such chemotaxis, such as performed by immune cells migrating to a wound site, is complicated by the complex geometry inside living tissues. In this study, we extend our theoretical…

In this paper, we investigate the quest for a single target, that remains fixed in a lattice, by a set of independent walkers. The target exhibits a fluctuating behavior between trap and ordinary site of the lattice, whereas the walkers…

统计力学 · 物理学 2021-10-18 Félix Rojo , Pedro A. Pury , Carlos E. Budde

Chemotaxis is typically modeled in the context of cellular motion towards a static, exogenous source of chemoattractant. Here, we propose a time-dependent mechanism of chemotaxis in which a self-propelled particle ({\it e.g.}, a cell)…

细胞行为 · 定量生物学 2026-05-12 Sarah A. Nowak , Buddhapriya Chakrabarti , Tom Chou , Ajay Gopinathan

We introduce a generic, purely mechanical model for environment sensitive motion of mammalian cells that is applicable to chemotaxis, haptotaxis, and durotaxis as modes of motility. It is able to theoretically explain all relevant…

细胞行为 · 定量生物学 2016-05-09 Patrick Bitter , Kristof Leon Beck , Peter Lenz

In the chemotactic motion of Escherichia coli, the switching of transmembrane chemoreceptors between active and inactive states is one of the most important steps of the signaling pathway. We study the effect of this switching time-scale on…

细胞行为 · 定量生物学 2022-08-18 Shobhan Dev Mandal , Sakuntala Chatterjee

We study the search kinetics of an immobile target by a concentration of randomly moving searchers. The object of the study is to optimize the probability of detection within the constraints of our model. The target is hidden on a…

统计力学 · 物理学 2009-11-11 G. Oshanin , H. S. Wio , K. Lindenberg , S. F. Burlatsky

To successfully navigate chemical gradients, microorganisms need to predict how the ligand concentration changes in space. Due to their limited size, they do not take a spatial derivative over their body length but rather a temporal…

分子网络 · 定量生物学 2024-02-09 Age J. Tjalma , Pieter Rein ten Wolde

Migration of immune cells within the human body allows them to fulfill their main function of detecting pathogens. Adopting an optimal navigation and search strategy by these cells is of crucial importance to achieve an efficient immune…

软凝聚态物质 · 物理学 2021-01-04 M. Reza Shaebani , Robin Jose , Ludger Santen , Luiza Stankevicins , Franziska Lautenschläger

We study chemotaxis of a single {\sl E.coli} bacterium in a medium where the nutrient chemical is also undergoing diffusion and its concentration has the form of a Gaussian whose width increases with time. We measure the average first…

细胞行为 · 定量生物学 2015-04-30 Subrata Dev , Sakuntala Chatterjee

Stochastic search processes are ubiquitous in nature and are expected to become more efficient when equipped with a memory, where the searcher has been before. A natural realization of a search process with long-lasting memory is a…

统计力学 · 物理学 2021-08-18 Hugues Meyer , Heiko Rieger