相关论文: Phylogenetic incongruence through the lens of Mona…
Bounded treewidth and Monadic Second Order (MSO) logic have proved to be key concepts in establishing fixed-parameter tractability results. Indeed, by Courcelle's Theorem we know: Any property of finite structures, which is expressible by…
One of Courcelle's celebrated results states that if C is a class of graphs of bounded tree-width, then model-checking for monadic second order logic is fixed-parameter tractable on C by linear time parameterised algorithms. An immediate…
One of Courcelle's celebrated results states that if C is a class of graphs of bounded tree-width, then model-checking for monadic second order logic (MSO_2) is fixed-parameter tractable (fpt) on C by linear time parameterized algorithms,…
Courcelle's famous theorem from 1990 states that any property of graphs definable in monadic second-order logic (MSO) can be decided in linear time on any class of graphs of bounded treewidth, or in other words, MSO is fixed-parameter…
This paper presents a complete axiomatization of Monadic Second-Order Logic (MSO) over infinite trees. MSO on infinite trees is a rich system, and its decidability ("Rabin's Tree Theorem") is one of the most powerful known results…
One of the most famous algorithmic meta-theorems states that every graph property that can be defined by a sentence in counting monadic second order logic (CMSOL) can be checked in linear time for graphs of bounded treewidth, which is known…
We consider a specific class of tree structures that can represent basic structures in linguistics and computer science such as XML documents, parse trees, and treebanks, namely, finite node-labeled sibling-ordered trees. We present…
In this article we study the treewidth of the \emph{display graph}, an auxiliary graph structure obtained from the fusion of phylogenetic (i.e., evolutionary) trees at their leaves. Earlier work has shown that the treewidth of the display…
Monadic Second-Order Logic (MSO) extends First-Order Logic (FO) with variables ranging over sets and quantifications over those variables. We introduce and study Monadic Tree Logic (MTL), a fragment of MSO interpreted on infinite-tree…
Graph polynomials which are definable in Monadic Second Order Logic (MSOL) on the vocabulary of graphs are Fixed-Parameter Tractable (FPT) with respect to clique-width. In contrast, graph polynomials which are definable in MSOL on the…
A class of graph languages is definable in Monadic Second-Order logic (MSO) if and only if it consists of sets of models of MSO formul{\ae}. If, moreover, there is a computable bound on the tree-widths of the graphs in each such set, the…
In phylogenetics, distances are often used to measure the incongruence between a pair of phylogenetic trees that are reconstructed by different methods or using different regions of genome. Motivated by the maximum parsimony principle in…
We prove decidability of the boundedness problem for monadic least fixed-point recursion based on positive monadic second-order (MSO) formulae over trees. Given an MSO-formula phi(X,x) that is positive in X, it is decidable whether the…
This paper settles the computational complexity of model checking of several extensions of the monadic second order (MSO) logic on two classes of graphs: graphs of bounded treewidth and graphs of bounded neighborhood diversity. A classical…
Algorithmic meta-theorems state that problems definable in a fixed logic can be solved efficiently on structures with certain properties. An example is Courcelle's Theorem, which states that all problems expressible in monadic second-order…
One of the most famous algorithmic meta-theorems states that every graph property that can be defined by a sentence in counting monadic second order logic (CMSOL) can be checked in linear time for graphs of bounded treewidth, which is known…
Monadic second order logic (MSO2) plays an important role in parameterized complexity due to the Courcelle's theorem. This theorem states that the problem of checking if a given graph has a property specified by a given MSO2 formula can be…
Brambles were introduced as the dual notion to treewidth, one of the most central concepts of the graph minor theory of Robertson and Seymour. Recently, Grohe and Marx showed that there are graphs G, in which every bramble of order larger…
Query evaluation on probabilistic databases is generally intractable (#P-hard). Existing dichotomy results have identified which queries are tractable (or safe), and connected them to tractable lineages. In our previous work, using…
In phylogenetics, a central problem is to infer the evolutionary relationships between a set of species $X$; these relationships are often depicted via a phylogenetic tree -- a tree having its leaves univocally labeled by elements of $X$…