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We study the synchronization behavior of discrete-time Markov chains on countable state spaces. Representing a Markov chain in terms of a random dynamical system, which describes the collective dynamics of trajectories driven by the same…

动力系统 · 数学 2025-08-14 Robin Chemnitz , Maximilian Engel , Guillermo Olicón-Mendez

We study how the dynamics of a class of discrete dynamical system models for neuronal networks depends on the connectivity of the network. Specifically, we assume that the network is an Erd\H{o}s-R\'{enyi} random graph and analytically…

动力系统 · 数学 2014-04-23 Winfried Just , Sungwoo Ahn

Despite their apparent simplicity, random Boolean networks display a rich variety of dynamical behaviors. Much work has been focused on the properties and abundance of attractors. We here derive an expression for the number of attractors in…

分子网络 · 定量生物学 2007-05-23 Björn Samuelsson , Carl Troein

We introduce a numerical method to study random Boolean networks with asynchronous stochas- tic update. Each node in the network of states starts with equal occupation probability and this probability distribution then evolves to a steady…

统计力学 · 物理学 2015-05-18 Amer Shreim , Andrew Berdahl , Florian Greil , Jörn Davidsen , Maya Paczuski

The mammalian brain could contain dense and sparse network connectivity structures, including both excitatory and inhibitory neurons, but is without any clearly defined output layer. The neurons have time constants, which mean that the…

神经元与认知 · 定量生物学 2021-06-04 Udaya B. Rongala , Henrik Jörntell

Discrete dynamical systems in which model components take on categorical values have been successfully applied to biological networks to study their global dynamic behavior. Boolean models in particular have been used extensively. However,…

定量方法 · 定量生物学 2021-09-09 Etan Basser-Ravitz , Arman Darbar , Julia Chifman

We consider a neural network with adapting synapses whose dynamics can be analitically computed. The model is made of $N$ neurons and each of them is connected to $K$ input neurons chosen at random in the network. The synapses are…

无序系统与神经网络 · 物理学 2009-10-30 G. Lattanzi , G. Nardulli , G. Pasquariello , S. Stramaglia

We study the dynamical states that emerge in a small-world network of recurrently coupled excitable neurons through both numerical and analytical methods. These dynamics depend in large part on the fraction of long-range connections or…

神经元与认知 · 定量生物学 2009-11-13 Hermann Riecke , Alex Roxin , Santiago Madruga , Sara A. Solla

We study the stable attractors of a class of continuous dynamical systems that may be idealized as networks of Boolean elements, with the goal of determining which Boolean attractors, if any, are good approximations of the attractors of…

分子网络 · 定量生物学 2009-11-13 Johannes Norrell , Björn Samuelsson , Joshua E. S. Socolar

This work explores a synchronization-like phenomenon induced by common noise for continuous-time Markov jump processes given by chemical reaction networks. A corresponding random dynamical system is formulated in a two-step procedure, at…

Biological neural networks are notoriously hard to model due to their stochastic behavior and high dimensionality. We tackle this problem by constructing a dynamical model of both the expectations and covariances of the fractions of active…

神经元与认知 · 定量生物学 2025-02-25 Vincent Painchaud , Patrick Desrosiers , Nicolas Doyon

Population dynamics are often subject to random independent changes in the environment. For the two strategy stochastic replicator dynamic, we assume that stochastic changes in the environment replace the payoffs and variance. This is…

种群与进化 · 定量生物学 2014-06-11 Andrew Vlasic

Attractor neural networks consider that neural information is stored as stationary states of a dynamical system formed by a large number of interconnected neurons. The attractor property empowers a neural system to encode information…

神经元与认知 · 定量生物学 2024-10-10 Yujun Li , Tianhao Chu , Si Wu

Genetic regulatory networks are usually modeled by systems of coupled differential equations and by finite state models, better known as logical networks, are also used. In this paper we consider a class of models of regulatory networks…

动力系统 · 数学 2015-06-26 Ricardo Lima , Edgardo Ugalde

In complex systems, the interplay between nonlinear and stochastic dynamics, e.g., J. Monod's necessity and chance, gives rise to an evolutionary process in Darwinian sense, in terms of discrete jumps among attractors, with punctuated…

适应与自组织系统 · 物理学 2013-03-18 Hong Qian

Identification of attractors, that is, stable states and sustained oscillations, is an important step in the analysis of Boolean models and exploration of potential variants. We describe an approach to the search for asynchronous cyclic…

离散数学 · 计算机科学 2024-03-29 Elisa Tonello , Loïc Paulevé

Attractor networks are an influential theory for memory storage in brain systems. This theory has recently been challenged by the observation of strong temporal variability in neuronal recordings during memory tasks. In this work, we study…

神经元与认知 · 定量生物学 2021-12-02 Ulises Pereira-Obilinovic , Johnatan Aljadeff , Nicolas Brunel

We consider a dynamic social network model in which agents play repeated games in pairings determined by a stochastically evolving social network. Individual agents begin to interact at random, with the interactions modeled as games. The…

概率论 · 数学 2007-05-23 Brian Skyrms , Robin Pemantle

Modular organization characterizes many complex networks occurring in nature, including the brain. In this paper we show that modular structure may be responsible for increasing the robustness of certain dynamical states of such systems. In…

无序系统与神经网络 · 物理学 2015-05-27 Neeraj Pradhan , Subinay Dasgupta , Sitabhra Sinha

Boolean Networks (BNs) describe the time evolution of binary states using logic functions on the nodes of a network. They are fundamental models for complex discrete dynamical systems, with applications in various areas of science and…

离散数学 · 计算机科学 2025-03-26 Van-Giang Trinh , Samuel Pastva , Jordan Rozum , Kyu Hyong Park , Réka Albert
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