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Two important problems affect the ability of asexual populations to accumulate beneficial mutations, and hence to adapt. First, clonal interference causes some beneficial mutations to be outcompeted by more-fit mutations which occur in the…

种群与进化 · 定量生物学 2008-04-08 Craig A. Fogle , James L. Nagle , Michael M. Desai

The evolution of dispersal rate is studied with a model of several local populations linked by dispersal. Three dispersal strategies are considered where all, half, or none of the offspring disperse. The spatial scale (number of patches)…

种群与进化 · 定量生物学 2019-03-12 Emmanuel Paradis

Mutualistic networks are formed when the interactions between two classes of species are mutually beneficial. They are important examples of cooperation shaped by evolution. Mutualism between animals and plants plays a key role in the…

种群与进化 · 定量生物学 2013-08-23 Samir Suweis , Filippo Simini , Jayanth R. Banavar , Amos Maritan

Most organisms grow in space, whether they are viruses spreading within a host tissue or invasive species colonizing a new continent. Evolution typically selects for higher expansion rates during spatial growth, but it has been suggested…

种群与进化 · 定量生物学 2022-05-18 Hyunseok Lee , Jeff Gore , Kirill S. Korolev

This work investigates a model describing the interaction of two species in habiting separate but adjacent areas. These populations are governed by a system of equations that account for spatial variations in growth rates and the effects of…

偏微分方程分析 · 数学 2025-07-25 Pablo Álvarez-Caudevilla , Cristina Brändle , Fermin González-Pereiro

In large asexual populations, multiple beneficial mutations arise in the population, compete, interfere with each other, and accumulate on the same genome, before any of them fix. The resulting dynamics, although studied by many authors, is…

种群与进化 · 定量生物学 2015-06-11 Daniel S. Fisher

Recent studies have shown that packings of cells, both eukaryotic cellular tissues and growing or swarming bacterial colonies, can often be understood as active nematic fluids. A key property of volume-conserving active nematic model…

软凝聚态物质 · 物理学 2022-05-12 Fabian Jan Schwarzendahl , Daniel A. Beller

When beneficial mutations are rare, they accumulate by a series of selective sweeps. But when they are common, many beneficial mutations will occur before any can fix, so there will be many different mutant lineages in the population…

种群与进化 · 定量生物学 2007-05-23 Michael M. Desai , Daniel S. Fisher

Motivated by tumor growth and spatial population genetics, we study the interplay between evolutionary and spatial dynamics at the surfaces of three-dimensional, spherical range expansions. We consider range expansion radii that grow with…

种群与进化 · 定量生物学 2015-06-02 Maxim O. Lavrentovich , David R. Nelson

When organisms adapt to spatially heterogeneous environments, selection may drive divergence at multiple genes. If populations under divergent selection also exchange migrants, we expect genetic differentiation to be high at selected loci,…

种群与进化 · 定量生物学 2014-07-21 Simon Aeschbacher , Reinhard Buerger

The symmetric distribution and all other states in the symmetry sector of the frequency trajectory increase mean fitness during competitive replication at sublinear propagation rates (parabolic time course). States in the non-symmetry…

生物物理 · 物理学 2007-05-23 Brian K. Davis

Cooperation within asymmetric populations has garnered significant attention in evolutionary games. This paper explores cooperation evolution in populations with weak and strong players, using a game model where players choose between…

适应与自组织系统 · 物理学 2024-03-12 Hao Guo , Chen Shen , Rongcheng Zou , Pin Tao , Yuanchun Shi , Zhen Wang , Junliang Xing

When beneficial mutations are relatively common, competition between multiple unfixed mutations can reduce the rate of fixation in well-mixed asexual populations. We introduce a one dimensional model with a steady accumulation of beneficial…

种群与进化 · 定量生物学 2013-02-19 Jakub Otwinowski , Stefan Boettcher

Antimicrobial resistance to drugs (AMR), a global threat to human and animal health, is often regarded as resulting from cooperative behaviour. Moreover, microbes generally evolve in volatile environments that, together with demographic…

种群与进化 · 定量生物学 2024-06-18 Lluís Hernández-Navarro , Matthew Asker , Mauro Mobilia

The growth and evolution of microbial populations is often subjected to advection by fluid flows in spatially extended environments, with immediate consequences for questions of spatial population genetics in marine ecology, planktonic…

种群与进化 · 定量生物学 2022-08-26 Roberto Benzi , David R. Nelson , Suraj Shankar , Federico Toschi , Xiaojue Zhu

A microscopic agent dynamical model for diploid age-structured populations is used to study evolution of polymorphism and sympatric speciation. The underlying ecology is represented by a unimodal distribution of resources of some width.…

种群与进化 · 定量生物学 2015-06-26 E. Brigatti , J. S. Sa' Martins , I. Roditi

We have simulated the evolution of age structured populations whose individuals represented by their diploid genomes were distributed on a square lattice. The environmental conditions on the whole territory changed simultaneously in the…

种群与进化 · 定量生物学 2009-11-05 Wojciech Waga , Marta Zawierta , Stanislaw Cebrat

Cooperation is ubiquitous ranging from multicellular organisms to human societies. Population structures indicating individuals' limited interaction ranges are crucial to understand this issue. But it is still at large to what extend…

生物物理 · 物理学 2014-04-18 Aming Li , Bin Wu , Long Wang

Antagonistic coevolution between hosts and parasites can have a major impact on host population structures, and hence on the evolution of social traits. Using stochastic modelling techniques in the context of bacteria-virus interactions, we…

种群与进化 · 定量生物学 2012-10-09 Benjamin J. Z. Quigley , Diana García López , Angus Buckling , Alan J. McKane , Sam P. Brown

Mutualistic interactions, which are beneficial for both interacting species, are recurrently present in ecosystems. Observations of natural systems showed that, if we draw mutualistic relationships as binary links between species, the…

物理与社会 · 物理学 2019-08-21 Clàudia Payrató Borrás , Laura Hernández , Yamir Moreno