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Typical biomolecular systems such as cellular membranes, DNA, and protein complexes are highly charged. Thus, efficient and accurate treatment of electrostatic interactions is of great importance in computational modelling of such systems.…

软凝聚态物质 · 物理学 2007-05-23 Michael Patra , Marja T. Hyvonen , Emma Falck , Mohsen Sabouri-Ghomi , Ilpo Vattulainen , Mikko Karttunen

Simulations based on particle methods, such as Smoothed Particle Hydrodynamics (SPH), are known to be computationally demanding. While such methods have for long been executed in parallel on multi-core CPUs, in recent years the increasing…

计算工程、金融与科学 · 计算机科学 2026-03-18 Xiangyu Hu , Alberto Guarnieri

The growing demand for multi-DNN workloads with unpredictable task arrival times has highlighted the need for interruptible scheduling on edge accelerators. However, existing preemptive frameworks typically assume known task arrival times…

硬件体系结构 · 计算机科学 2026-03-24 Boran Zhao , Hetian Liu , Zihang Yuan , Yanbin Hu , Wenzhe Zhao , Tian Xia , Pengju Ren

A quantum annealer exploits quantum effects to solve a particular type of optimization problem. The advantage of this specialized hardware is that it effectively considers all possible solutions in parallel, thereby potentially…

编程语言 · 计算机科学 2018-04-03 Scott Pakin

Probabilistic programming languages (PPLs) are receiving widespread attention for performing Bayesian inference in complex generative models. However, applications to science remain limited because of the impracticability of rewriting…

We present a parallel solver for numerical constraint satisfaction problems (NCSPs) that can scale on a number of cores. Our proposed method runs worker solvers on the available cores and simultaneously the workers cooperate for the search…

人工智能 · 计算机科学 2014-11-07 Daisuke Ishii , Kazuki Yoshizoe , Toyotaro Suzumura

This paper presents a large-scale parallel solver, specifically designed to tackle the challenges of solving high-dimensional and high-contrast linear systems in heat transfer topology optimization. The solver incorporates an interpolation…

数值分析 · 数学 2025-01-14 Yingjie Zhou , Changqing Ye , Yucheng Liu , Shubin Fu , Eric T. Chung

Fault tolerance overhead of high performance computing (HPC) applications is becoming critical to the efficient utilization of HPC systems at large scale. HPC applications typically tolerate fail-stop failures by checkpointing. Another…

分布式、并行与集群计算 · 计算机科学 2011-06-22 Erlin Yao , Mingyu Chen , Rui Wang , Wenli Zhang , Guangming Tan

Multi-threaded programs are expected to improve responsiveness and conserve resources by dividing an application process into multiple threads for concurrent processing. However, due to scheduling and the interaction of multiple threads,…

软件工程 · 计算机科学 2024-09-26 Takumi Murata , Hiroaki Hashiura

This paper addresses a multi-label predictive fault classification problem for multidimensional time-series data. While fault (event) detection problems have been thoroughly studied in literature, most of the state-of-the-art techniques…

机器学习 · 计算机科学 2020-01-29 Wenyu Zhang , Devesh K. Jha , Emil Laftchiev , Daniel Nikovski

Particle accelerators are among the largest, most complex devices. To meet the challenges of increasing energy, intensity, accuracy, compactness, complexity and efficiency, increasingly sophisticated computational tools are required for…

加速器物理 · 物理学 2023-01-13 Axel Huebl , Remi Lehe , Chad E. Mitchell , Ji Qiang , Robert D. Ryne , Ryan T. Sandberg , Jean-Luc Vay

Although recent scaling up approaches to training deep neural networks have proven to be effective, the computational intensity of large and complex models, as well as the availability of large-scale datasets, require deep learning…

分布式、并行与集群计算 · 计算机科学 2021-04-21 Bita Hasheminezhad , Shahrzad Shirzad , Nanmiao Wu , Patrick Diehl , Hannes Schulz , Hartmut Kaiser

Multi-label classification (MLC) is an important class of machine learning problems that come with a wide spectrum of applications, each demanding a possibly different evaluation criterion. When solving the MLC problems, we generally expect…

机器学习 · 计算机科学 2019-10-08 Yao-Yuan Yang , Yi-An Lin , Hong-Min Chu , Hsuan-Tien Lin

A parallel computer system is a collection of processing elements that communicate and cooperate to solve large computational problems efficiently. To achieve this, at first the large computational problem is partitioned into several tasks…

分布式、并行与集群计算 · 计算机科学 2011-09-09 Ardhendu Mandal , Subhas Chandra Pal

Control parallelism and data parallelism is mostly reasoned and optimized as separate functions. Because of this, workloads that are irregular, fine-grain and dynamic such as dynamic graph processing become very hard to scale. An…

分布式、并行与集群计算 · 计算机科学 2023-03-08 Bibrak Qamar Chandio , Thomas Sterling , Prateek Srivastava

High-dimensional multiplex graphs are characterized by their high number of complementary and divergent dimensions. The existence of multiple hierarchical latent relations between the graph dimensions poses significant challenges to…

机器学习 · 计算机科学 2025-01-30 Kamel Abdous , Nairouz Mrabah , Mohamed Bouguessa

Modern machine learning workloads use large models, with complex structures, that are very expensive to execute. The devices that execute complex models are becoming increasingly heterogeneous as we see a flourishing of domain-specific…

机器学习 · 计算机科学 2020-11-02 Jakub Tarnawski , Amar Phanishayee , Nikhil R. Devanur , Divya Mahajan , Fanny Nina Paravecino

This paper investigates co-scheduling algorithms for processing a set of parallel applications. Instead of executing each application one by one, using a maximum degree of parallelism for each of them, we aim at scheduling several…

数据结构与算法 · 计算机科学 2013-05-01 Guillaume Aupy , Manu Shantharam , Anne Benoit , Yves Robert , Padma Raghavan

With the wide penetration of smart robots in multifarious fields, Simultaneous Localization and Mapping (SLAM) technique in robotics has attracted growing attention in the community. Yet collaborating SLAM over multiple robots still remains…

机器人学 · 计算机科学 2022-01-25 Peng Huang , Liekang Zeng , Xu Chen , Ke Luo , Zhi Zhou , Shuai Yu

Molecular dynamics is widely used to study various phenomena, such as diffusion, shock wave propagation, and plasma dynamics. A wide range of software packages supports the expanding scope of molecular dynamics applications. However, the…

计算物理 · 物理学 2025-12-01 I. S. Galtsov , R. V. Muratov , G. V. Vyskvarko , S. A. Murzov , S. A. Dyachkov , P. R. Levashov