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Radiology reports capture crucial longitudinal information on tumor burden, treatment response, and disease progression, yet their unstructured narrative format complicates automated analysis. While large language models (LLMs) have…

计算与语言 · 计算机科学 2026-03-12 Luc Builtjes , Alessa Hering

Clinical decision support systems require models that are not only highly accurate but also equitable and sensitive to the implications of missed diagnoses. In this study, we introduce a knowledge-guided in-context learning (ICL) framework…

机器学习 · 计算机科学 2025-07-28 Fatemeh Nazary , Yashar Deldjoo , Tommaso Di Noia , Eugenio di Sciascio

Large Language Models (LLMs) have fundamentally transformed approaches to Natural Language Processing (NLP) tasks across diverse domains. In healthcare, accurate and cost-efficient text classification is crucial, whether for clinical notes…

计算与语言 · 计算机科学 2026-02-16 Hajar Sakai , Sarah S. Lam

Large language models (LLMs) have immense potential to make information more accessible, particularly in medicine, where complex medical jargon can hinder patient comprehension of clinical notes. We developed a patient-facing tool using…

This study introduces a novel approach to sentence-level relation extraction (RE) that integrates Graph Neural Networks (GNNs) with Large Language Models (LLMs) to generate contextually enriched support documents. By harnessing the power of…

计算与语言 · 计算机科学 2024-11-01 Vicky Dong , Hao Yu , Yao Chen

This paper explores the advancements and applications of language models in healthcare, focusing on their clinical use cases. It examines the evolution from early encoder-based systems requiring extensive fine-tuning to state-of-the-art…

人工智能 · 计算机科学 2025-05-12 Nikita Neveditsin , Pawan Lingras , Vijay Mago

Large language models (LLMs) have made significant progress in various domains, including healthcare. However, the specialized nature of clinical language understanding tasks presents unique challenges and limitations that warrant further…

计算与语言 · 计算机科学 2023-08-01 Yuqing Wang , Yun Zhao , Linda Petzold

Text mining is a process of extracting information of interest from text. Such a method includes techniques from various areas such as Information Retrieval (IR), Natural Language Processing (NLP), and Information Extraction (IE). In this…

信息检索 · 计算机科学 2015-07-10 Santosh Tirunagari

Electronic health records include information on patients' status and medical history, which could cover the history of diseases and disorders that could be hereditary. One important use of family history information is in precision health,…

计算与语言 · 计算机科学 2024-03-18 Xiang Dai , Sarvnaz Karimi , Nathan O'Callaghan

Following the global COVID-19 pandemic, the number of scientific papers studying the virus has grown massively, leading to increased interest in automated literate review. We present a clinical text mining system that improves on previous…

计算与语言 · 计算机科学 2020-12-09 Veysel Kocaman , David Talby

Relation Extraction (RE), the task of detecting and characterizing semantic relations between entities in text, has gained much importance in the last two decades, mainly in the biomedical domain. Many papers have been published on Relation…

人工智能 · 计算机科学 2020-01-14 Rinaldo Lima , Bernard Espinasse , Fred Freitas

Large Language Models (LLMs) have become a key topic in AI and NLP, transforming sectors like healthcare, finance, education, and marketing by improving customer service, automating tasks, providing insights, improving diagnostics, and…

人工智能 · 计算机科学 2025-12-05 Vignesh Kumar Kembu , Pierandrea Morandini , Marta Bianca Maria Ranzini , Antonino Nocera

Clinical notes often describe important aspects of a patient's stay and are therefore critical to medical research. Clinical concept extraction (CCE) of named entities - such as problems, tests, and treatments - aids in forming an…

计算与语言 · 计算机科学 2018-03-07 Willie Boag , Elena Sergeeva , Saurabh Kulshreshtha , Peter Szolovits , Anna Rumshisky , Tristan Naumann

Evidence-based medicine, the practice in which healthcare professionals refer to the best available evidence when making decisions, forms the foundation of modern healthcare. However, it relies on labour-intensive systematic reviews, where…

计算与语言 · 计算机科学 2021-12-13 Jetsun Whitton , Anthony Hunter

Natural language processing (NLP) of clinical trial documents can be useful in new trial design. Here we identify entity types relevant to clinical trial design and propose a framework called CT-BERT for information extraction from clinical…

定量方法 · 定量生物学 2021-10-20 Xiong Liu , Greg L. Hersch , Iya Khalil , Murthy Devarakonda

Relation extraction with accurate precision is still a challenge when processing full text databases. We propose an approach based on cooccurrence analysis in each document for which we used document organization to improve accuracy of…

计算与语言 · 计算机科学 2015-04-24 Nicolas Turenne , Tien Phan

Current approaches for clinical information extraction are inefficient in terms of computational costs and memory consumption, hindering their application to process large-scale electronic health records (EHRs). We propose an efficient…

计算与语言 · 计算机科学 2023-02-09 Anthony Yazdani , Dimitrios Proios , Hossein Rouhizadeh , Douglas Teodoro

Natural Language Processing (NLP) systems often make use of machine learning techniques that are unfamiliar to end-users who are interested in analyzing clinical records. Although NLP has been widely used in extracting information from…

人机交互 · 计算机科学 2017-07-10 Gaurav Trivedi , Phuong Pham , Wendy Chapman , Rebecca Hwa , Janyce Wiebe , Harry Hochheiser

Relation Extraction (RE) is a fundamental task of information extraction, which has attracted a large amount of research attention. Previous studies focus on extracting the relations within a sentence or document, while currently…

计算与语言 · 计算机科学 2022-11-01 Fengqi Wang , Fei Li , Hao Fei , Jingye Li , Shengqiong Wu , Fangfang Su , Wenxuan Shi , Donghong Ji , Bo Cai

Clinical text is rich in information, with mentions of treatment, medication and anatomy among many other clinical terms. Multiple terms can refer to the same core concepts which can be referred as a clinical entity. Ontologies like the…

计算与语言 · 计算机科学 2024-05-28 Akshit Achara , Sanand Sasidharan , Gagan N